Gene Pnuc_1728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1728 
Symbol 
ID5051942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp1800206 
End bp1801297 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content45% 
IMG OID640471901 
Productinner-membrane translocator 
Protein accessionYP_001156505 
Protein GI145589908 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTTAAGA AGATCGCCTC CAACCACTTA AACAAAACTA CCTATCTTTG GCTTGGTGTA 
TTGACTTTAT TACTATTACC TTGGGTGGTA GGTGCGGCTG GTGGAAATTA CTGGGTGCGA 
GTTCTTGATT TTGCTTTGCT CTACGTCGTT CTGGCATTAG GGCTCAATGT AGTTGTTGGC 
TTTGCTGGTT TGCTTGATTT AGGGTACATC GCTTTTTATG CTCTGGGCGC GTACAGCTTT 
GCTTTATTGG CTTCCCCCCA TTTGCCTCAA CAGTTTGAAG CTGTTGCCGC TGCCTTTCCA 
GAAGGTATGC ATTTTTCACC ATGGATGGTG GCGATCTTCG CTATTGTTTT GGCTGCCTTA 
TTTGGGGTTA TTTTAGGATT ACCAACCCTG CAGCTGCGGG GTGATTACTT AGCAATTGTG 
ACCTTGGGCT TTGGAGAGAT TATTCGCATC TTTATGAATA ATTTAGACCG TCCGTTAAAC 
CTAACCAATG GCCCCAAGGG AATAACCAAG ATTGATCCTT TGCAAGTTTT TGGGATCTCT 
TTTGCGAAGA CCTTGGATTT GGGTTTTGTC AAAATCCCTA GTTTGTATTT AGTGTTTTAT 
TTGTTTCTTG TGTTAGCAAC TACGGTTGCA TTCATCTGCA TGCATTTGCA AAACTCTCGA 
ATTGGGCGAG CATGGGTAGC CATACGCGAG GATGAAATCG CAGCAAAGGC GATGGGTATC 
AATACTCGCA ACATGAAGCT GTTGGCTTTT GCGATTGGTG CTTCCTTTGC TGGTGTTGCG 
GGCGTTCTCT TTGCGGCCTT TCAGGGGTTT GTTTCGCCAG AGTCATTTAC CCTTTGGGAA 
TCTATTGTGG TTCTCGCTAT GGTGGTTTTA GGTGGAATTG GTCATATCCC TGGAGTGATT 
CTGGGTGCAG TGGTATTAGC AGTTTTCCCT GAAGTATTGC GGGGTATCGC CGAGCCACTG 
CAAAAAGCCC TTTTTGGTCA TGTGATTGTC GATGTTGAAG TGATTCGTCA ATTAATTTAT 
GGATTGGCGC TGATATTGAT CATGTTGTAT CGCCCTGGCG GTATTTGGCA AAAGCAGGAA 
GTGCAGTCAT GA
 
Protein sequence
MLKKIASNHL NKTTYLWLGV LTLLLLPWVV GAAGGNYWVR VLDFALLYVV LALGLNVVVG 
FAGLLDLGYI AFYALGAYSF ALLASPHLPQ QFEAVAAAFP EGMHFSPWMV AIFAIVLAAL 
FGVILGLPTL QLRGDYLAIV TLGFGEIIRI FMNNLDRPLN LTNGPKGITK IDPLQVFGIS 
FAKTLDLGFV KIPSLYLVFY LFLVLATTVA FICMHLQNSR IGRAWVAIRE DEIAAKAMGI 
NTRNMKLLAF AIGASFAGVA GVLFAAFQGF VSPESFTLWE SIVVLAMVVL GGIGHIPGVI 
LGAVVLAVFP EVLRGIAEPL QKALFGHVIV DVEVIRQLIY GLALILIMLY RPGGIWQKQE 
VQS