| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1725 |
|---|
| Symbol | argD |
|---|
| ID | 5052004 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009379 |
|---|
| Strand | + |
|---|
| Start bp | 1797507 |
|---|
| End bp | 1798700 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640471898 |
|---|
| Product | acetylornithine transaminase protein |
|---|
| Protein accession | YP_001156502 |
|---|
| Protein GI | 145589905 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
|---|
| TIGRFAM ID | [TIGR00707] acetylornithine and succinylornithine aminotransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAGC CAATACAAGC CATCGACACC CACTCAGTGA TGTTTATTAC TCCGCGCCCT
GACGTAATCA TGGTTGAAGG TAAGGGCTCA TGGTTAGTAG ACAACAACGG TAAACGCTAT
TTAGACTTCC TACAAGGTTG GGCAGTCAAC TGCTTGGGCC ATGGCAACCC TGGAATGATT
GAAGCCCTCA ATGCGCAAGC AAAAAAGCTC ATTAATCCCA GTCCTGCTTT TTATAACGAG
CCTATGATTG GCTTGTCAAA TTTACTGACT ACCAATAGCT GCTTTAACAA AGTCTTTTTT
GCCAACAGCG GTGCTGAGGC CAACGAAGGC GCAATTAAGT TAGCGCGCAA ATGGGGTCAA
CTGAATAAAT CAGGTGCCTT TGAAATTATC ACTTTTGATC ATAGTTTTCA TGGTCGTACT
TTAGCTACGA TGAGCGCCTC TGGCAAACCC AATTGGGACA CGATGTTTGC TCCCCAAGTA
GCCGGCTTTC CAAAGGCAGA CTTGAATGAC TTGGAGTCCG TTAAAAAACT CGTGACCGAT
AAAACCGTAG CTGTGATGAT TGAGCCAGTG CAAGGTGAAG GTGGCGTCAT TCCCGCAACC
CAAGAATTTA TGCGTGAGCT ACGCAAGCTC ACCAAGGAAA ACAACATTCT CCTCATCTGT
GATGAAGTCC AAGCAGGATG CGGTCGTACC GGAACCCTCT TCGCTTACCA GCACTATGGC
ATTAAGCCAG ACATCATGAC CCTAGGCAAA GGTATTGGTG GCGGAGTACC GCTAGCTGCA
CTCTTAGCTA CCGATGCAGT TGCTTGCTTT GTGCCTGGCG ACCAAGGTGG TACCTACAAC
GGCAACCCGC TCATGACTGC TGTAGGTATT AGCGTGATTG AACAATTGCT TGCTCCTGGC
TTTTTGGATA GCGTTAAAGC TAAAGGGGAA TTACTGAAAT TAGAGTTATT AGAACTGTCT
GCTGAATTTG GTCTAGAGGG TGAACGTGGC GAAGGTTTGC TCCGCGCATT AATGCTAGGT
AACGATATCG GCGGCAAACT TGTTGAACTT GCTCGTGAAC GTAGTCCTGA GGGTTTATTA
ATTAACTCAC CAAGACCAAA CTTACTCCGT TTTATGCCAG CATTAAATGT GAGCGACGAT
GAAATCCTGC AAATGTGTGG CATGTTGCGT GAGCTACTGA AAGAAGTAGC TTAA
|
|---|
| Protein sequence | MNKPIQAIDT HSVMFITPRP DVIMVEGKGS WLVDNNGKRY LDFLQGWAVN CLGHGNPGMI
EALNAQAKKL INPSPAFYNE PMIGLSNLLT TNSCFNKVFF ANSGAEANEG AIKLARKWGQ
LNKSGAFEII TFDHSFHGRT LATMSASGKP NWDTMFAPQV AGFPKADLND LESVKKLVTD
KTVAVMIEPV QGEGGVIPAT QEFMRELRKL TKENNILLIC DEVQAGCGRT GTLFAYQHYG
IKPDIMTLGK GIGGGVPLAA LLATDAVACF VPGDQGGTYN GNPLMTAVGI SVIEQLLAPG
FLDSVKAKGE LLKLELLELS AEFGLEGERG EGLLRALMLG NDIGGKLVEL ARERSPEGLL
INSPRPNLLR FMPALNVSDD EILQMCGMLR ELLKEVA
|
|---|
| |