Gene Pnuc_1723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1723 
Symbol 
ID5051899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp1795481 
End bp1796377 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content49% 
IMG OID640471896 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_001156500 
Protein GI145589903 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTACTTA TGCAATCTTT TGGTAAACCT TCTGTCCTGA TTATTGGCTG CGGTGACATT 
GGTCTTCGAG TGGCTAAACA GCTATCTCGC AGTCATCGGG TCTTTGCATT GACATCCTCG
CCAAATCGCC TTCAGGAGTT GAGGGGGGTT GGCGCTATTC CAATTGTGGG GAATTTAGAT
CAGCCAGAAA CTTTATGGCG TCTTTCAAAT TTGGCGCAAA CCGTCATTCA TTTAGCGCCC
CCTCAAAATC ATGGAAATCG CGATTACCGA ACCCGCAACC TGTTGAGAAT TTTAGCCCAA
GGGCCCAATA CCGTCAGGCG CCTGATCTAT ATCAGCACTA CCGGTGTCTA CGGTGACCAT
CAGGGCGCCA AAGTGGACGA GGCAAGCCCT GTAAACCCTC AAAGTGAGCG AGCCAAGCGT
AGGGTGGATG CAGAGCGGAC TTTACGCTTA TGGGCTCCTG CCCATGGCGT CAGTCTCACT
ATTTTGCGAG TACCTGGTAT CTATGCGGCC GACCGTTTAC CTCTTGACCG ATTGAAGTCT
GGCACCCCAG CGCTGATTCC TGGCGAGGAC GCTTATTCAA ACCATATCCA TAGCGATGAT
TTAGCAAGAC TCGTTTGTGC AGCGGTCTAT CGTGGCAAGC CGCAACGAAT TATTAATACA
TGTGATGGTG GTGAAACCAA GATGGGTGAC TACTTTGATG AAGTGGCAGA TGCATTCGGT
TTACAAAGAC CCTCCAGATT GCCGGCAAGC GAGTTACAGC CATTGGTAAG CCCCATGCTC
TGGTCGTTTA TGCGTGAATC CAGACGGGTA ACTAATAAGC GCTTACAAGA ATTAAAAACC
CCGCTACGTT ATCCCAGCGT AGCGGATTTT CTGAAAACTA TTTCCAAGAA TCCTTAA
 
Protein sequence
MLLMQSFGKP SVLIIGCGDI GLRVAKQLSR SHRVFALTSS PNRLQELRGV GAIPIVGNLD 
QPETLWRLSN LAQTVIHLAP PQNHGNRDYR TRNLLRILAQ GPNTVRRLIY ISTTGVYGDH
QGAKVDEASP VNPQSERAKR RVDAERTLRL WAPAHGVSLT ILRVPGIYAA DRLPLDRLKS
GTPALIPGED AYSNHIHSDD LARLVCAAVY RGKPQRIINT CDGGETKMGD YFDEVADAFG
LQRPSRLPAS ELQPLVSPML WSFMRESRRV TNKRLQELKT PLRYPSVADF LKTISKNP