| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1719 |
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| Symbol | alaS |
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| ID | 5052003 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1788914 |
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| End bp | 1791538 |
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| Gene Length | 2625 bp |
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| Protein Length | 874 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640471892 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_001156496 |
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| Protein GI | 145589899 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.510988 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTAA CCCAAATTCG ACAGGCTTAC CTGGATTTCT TTGCCCAAAA AGGCCATCAA
ATAGTCCCTT CTAGCCCAGT GGTGCCAGGG GATGATCCAA CCTTGCTATT TACTAACGCG
GGAATGAACC AATTCAAGGA TGTTTTCTTG GGCTTTGATA AGCGTTCATA TACGCGTGCC
ACTACTGCCC AAAAATGTAT CCGGGCTGGT GGTAAGCACA ATGACTTAGA TAACGTTGGC
TATACCGCAC GTCACCACAC CTTTTTTGAG ATGTTGGGTA ACTTCTCTTT TGGCGATTAC
TTTAAGAAAG ATGCCATTCA ATTTGCCTGG GATTTATTAA CCCAAGTATT TGAGTTGCCC
AAAGACAAAC TTTTAGTAAC GGTCTACGCA GAAGATGACG AGGCATATGC TATTTGGAAA
GATCAAATCG GTGTGCCTGC AGAACGCATT ATTCGCATTG GTGATAACAA AGGAGCACGC
TACGCTTCTG ATAATTTTTG GATGATGGGT GACACTGGTC CATGCGGTCC ATGTACAGAA
ATTTTTTATG ATCATGGCGA GCATATTCCA GGGGGCCCTC CAGGAAGTCC CGATGAAGAT
GGCGATCGCT TTATTGAGAT TTGGAATAAC GTCTTTATGC AGTTCAACCG CGATGAAGCC
GGTGTGATGC ATCCATTGCC TAAGCCCAGC GTAGATACTG GCATGGGTCT AGAGCGTATT
GCTGCCGTGT TACAGCATGT CCATTCTAAT TATGAAATCG ATCTCTTCGT CAATCTCATC
AAGGCTGCGA AGGATACGGT AGATGGGGCT GGGGGCGAGA ATTGTGATGC TCAAAGCCCC
TCATTAAAAG TGATTGCTGA TCACATCCGA GCATGTAGTT TCATCGTTGT TGATGGTGTG
ATTCCTGGTA ATGCGGGTCG TGGTTATGTA TTGCGTCGTA TTGCACGACG CGCTATTCGT
CATGGTTATA AATTAGGTGC ACGCAAACCT TTCTTCTATC AATTGGTTCC TGCACTCGTC
AAAGAGATGG GCGATGCTTA TCCTGAGTTG CGTGCTGCAC AAGATAAAGT CAGCGAAGTA
TTGAAGCAAG AAGAAGAGCG CTTTTTCCAA ACAATTGCCA ATGGTATGGA AATTTTGGAT
GGTGCCTTAG CAGGTGGAGC GAAAGTGGTT GACGGTGAAA CCGCTTTCCG TCTGCATGAC
ACTTTTGGCT TCCCACTCGA CTTAACGGCA GACGTTTGCC GTGAGCGAGG CGTAACAGTG
GATAGCGAGG GTTTTGAAGT TGCGATGCAA AAGCAACGCG ATCAGGCAAG GGCAGCAGGT
AAATTTAAGG TTGCCCAAGG CCTGGATTAC AAAGGAGTAC CAACCCGGTT CCATGGTTAC
GAGACCCTCA AGCATGAAGG CGCCAAAATT ACCGCCCTCT ACTTAGATGG CTCAGCAGTC
AATTCTGTGA AGGCTGGTGA TGCTGCAGTA GTGGTTTTGG ATAACACCCC GTTCTATGCA
GAGTCAGGTG GCCAGGTTGG TGACAAGGGT GAACTTCGTA ATGAGGCAGC CCGCTTTACT
GTAGATGACA CCTTCAAGAT TCAGGCCGAT GTATTTGGTC ACCAAGGTGA AGTTCTCGAG
GGTGAGCTCA AGGTTGGCGA TACATTAAAT GCCTTGGTTG ATATTGCGCT AAGAAACGAT
ACGATGCGCA ACCATAGTGC GACTCATATT TTGCACAAAG CTTTGCGTGA AGTCCTAGGC
GATCATGTGC AACAAAAAGG GTCCTTAGTT GACGCTAGCA AAACGCGTTT TGACTTTACA
CACAACGCCC CAATTACCGC TGAACAAATT CGTCGCATTG AAGATATTGT GAATGCTGAA
ATTTTGGATA ACAGTGCTAC CTCAGGCAAA GTGATGTCTT TGGAAGATGC GCAAAAAACT
GGCGCCATGA TGCTCTTTGG TGAAAAGTAT GGTGACGAAG TCCGTGTTCT AGAGATCGGT
AGCTCTAAAG AGTTGTGTGG GGGTACCCAT GTGTCTCGCA CAGGCGATAT TGGTAGCTTG
AAGATTGTTT CTGAAGGTGG TGTCGCCGCC GGCATCCGTC GTGTAGAAGC CGTTACTGGC
CAGAATGCTT TGCATTTCTT GCAAGGCTTG GAAGACAAAA TCAATGAAGC TGCCACTATC
CTTAAAACGC ATCCGGGCGA TCTGGTAAAT CGGGTTGCAC AACTGCAAGA GAGTTTGCGT
TTAGCAGAGC GCGAGTTGGA AAAAGTGAAC TCTAAGTTGG CTGCAAGTCA GGGCGATGAG
TTGGCTGGTC AAGCAATAGA TGTCAACGGC TTAAAAGTGT TGGCTGCCCG TCTTGATGGC
GCAGATGCTG GTGTATTACG CGAAACAATG GATGCACTCA AGGCAAAACT GAAAACTGCT
GCAATTGTTT TGGCTTCAGT TCAGGGCGAT AAAGTCAGTT TGATTGCTGG TGTAACCGCC
GATTCTATTG CTAAGGTAAA AGCTGGCGAT CTCGTGAACT TTGTTGCTCA ACAGGTGGGC
GGCAAAGGAG GCGGTAAACC AGAGATGGCT ATGGCTGGTG GTAATGATCC TAGTAAGTTG
GGCGCTGCAT TGGATGGCGT TAAAGACTGG GTAGCAAGCA AATGA
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| Protein sequence | MKVTQIRQAY LDFFAQKGHQ IVPSSPVVPG DDPTLLFTNA GMNQFKDVFL GFDKRSYTRA
TTAQKCIRAG GKHNDLDNVG YTARHHTFFE MLGNFSFGDY FKKDAIQFAW DLLTQVFELP
KDKLLVTVYA EDDEAYAIWK DQIGVPAERI IRIGDNKGAR YASDNFWMMG DTGPCGPCTE
IFYDHGEHIP GGPPGSPDED GDRFIEIWNN VFMQFNRDEA GVMHPLPKPS VDTGMGLERI
AAVLQHVHSN YEIDLFVNLI KAAKDTVDGA GGENCDAQSP SLKVIADHIR ACSFIVVDGV
IPGNAGRGYV LRRIARRAIR HGYKLGARKP FFYQLVPALV KEMGDAYPEL RAAQDKVSEV
LKQEEERFFQ TIANGMEILD GALAGGAKVV DGETAFRLHD TFGFPLDLTA DVCRERGVTV
DSEGFEVAMQ KQRDQARAAG KFKVAQGLDY KGVPTRFHGY ETLKHEGAKI TALYLDGSAV
NSVKAGDAAV VVLDNTPFYA ESGGQVGDKG ELRNEAARFT VDDTFKIQAD VFGHQGEVLE
GELKVGDTLN ALVDIALRND TMRNHSATHI LHKALREVLG DHVQQKGSLV DASKTRFDFT
HNAPITAEQI RRIEDIVNAE ILDNSATSGK VMSLEDAQKT GAMMLFGEKY GDEVRVLEIG
SSKELCGGTH VSRTGDIGSL KIVSEGGVAA GIRRVEAVTG QNALHFLQGL EDKINEAATI
LKTHPGDLVN RVAQLQESLR LAERELEKVN SKLAASQGDE LAGQAIDVNG LKVLAARLDG
ADAGVLRETM DALKAKLKTA AIVLASVQGD KVSLIAGVTA DSIAKVKAGD LVNFVAQQVG
GKGGGKPEMA MAGGNDPSKL GAALDGVKDW VASK
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