| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1716 |
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| Symbol | |
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| ID | 5051936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 1784841 |
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| End bp | 1787732 |
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| Gene Length | 2892 bp |
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| Protein Length | 963 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640471889 |
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| Product | valyl-tRNA synthetase |
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| Protein accession | YP_001156493 |
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| Protein GI | 145589896 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0525] Valyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.894816 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAAATG CCTCAAATAC CCCTAATTCC CCAGCGGCTG GTTCAGTAGA CGAACTTGCC
AAATCCTATG AACCCGCCCC GATCGAAGCC TATTGGGGCC CCGAGTGGGA ACGCAGAGGT
ATAGCCGATG CAAGCATGGA TGAAGGTAAA GGCAATTTTT CTATACAGCT CCCTCCACCC
AATGTGACCG GGACCCTGCA TATGGGTCAC GCTTTCAATC AAACCATCAT GGATGGCTTA
GTGCGTCATG CCCGAATGGC AGGCAAAAAT ACCTTATGGG TTCCCGGCAC CGATCACGCT
GGTATTGCCA CTCAAATTGT TGTTGAGCGT CAACTCGATG CGCAAAAAGT TTCTCGTCAC
GATTTAGGTC GTGAGAAGTT CTTAGAAAAA GTTTGGGAAT GGAAGGAAAC TTCTGGCTCA
ACGATTACTC GTCAAATTCG TCGCTTAGGT GCTTCGATTG ATTGGGGTAA AGAGTACTTC
ACAATGGACA GCAAAATGTC CAAAGCGGTA GTGGAAGTAT TTGTCCGCCT GCATGAACAA
GGTTTAATTT ATCGCGGCAA ACGTTTGGTG AACTGGGATC CCGTTCTTGG AACTGCTGTG
TCTGATTTAG AAGTTGTCAG CGAAGAAGAA GATGGTTCTA TGTGGCATAT CCGCTACCCC
TTAGCCGATG GCTCTGGACA TCTCACCGTT GCGACTACGC GTCCGGAGAC CCTACTCGGT
GACGTCGCTG TGATGATTAA CCCAGAGGAT GAGCGTTATA AACACCTCAT TGGCAAGCTT
GTTAACCTGC CGCTCTGTGA TCGCCAAATC CCGATCATTG CTGATGACTA CGTTGATGTG
AACTTTGGTA CTGGCGTGGT GAAAGTCACC CCCGCTCACG ACTTTAATGA CTACGCTGTT
GGACAGCGCC ATCAACTTCC ATTAATCAAC ATTCTGACTT TAGATGCCAA GATTAATGAG
AATGCGCCTG CTACTTACCA AGGTCTAGAG CGCTTTGCTG CACGCAAACA AGTTGTTGCC
GATTTAGAGG CCGCTGGTTT ATTGGAAAAA GTGCAACCCC ATAAACTCAT GGTGCCTCGA
GGCGATCGTA CCCAAACCAT TATTGAACCG ATGTTGACGG ACCAATGGTT TGTGGCAATG
TCCAAGCCTA GTCAAGACAA TCAATATCAA CCAGGCTCAT CGATTGCAGG CGCTGCATTA
GATGCTGTCA CCAAGGGCGA TATCAAACTG GTTCCAGAAA ACTGGATTAA TACTTACACC
CAGTGGTTAG AGAATATTCA GGACTGGTGT ATTTCACGGC AACTCTGGTG GGGCCATCAA
ATCCCAGCCT GGTATGGCGA AGATGGGCAG ATCTTTGTAG CTCGTTCTGA AGAAGAAGCC
AAAACAAAAG CTGTAGCTGC TGGATATACC GGTCAACTTA ATCGTGACCC TGACGTATTA
GATACCTGGT TTAGTTCTGC GCTCGTGCCG TTTAGCTCAC TAGGTTGGCC AGAAGAAACG
CCAGCACTAA ATCATTTCTT ACCATCCTCT GTATTGGTAA CCGGTTTTGA CATCATCTTC
TTCTGGGTTG CTCGCATGGT GATGATGACC TGCCACTTCA CGGGGAAAGT TCCTTTTCAT
ACTGTTTACG TTCACGGACT TGTTCGTGAT GCTGAAGGTC AAAAGATGAG TAAATCCAAG
GGTAATACCC TGGATCCAAT TGATCTCATC GATGGCATCA AGATTGAAGA GTTAGTAAAC
AAGCGCACTA CTGGTCTGAT GAATCCAAAG CAAGCTGAAA GCATTGGCAA GAAAACTAAG
AAAGAATTTC CGGATGGTAT TCCGGCCTTT GGTACGGATG CCCTGCGCTT TACCTTCGCC
TCCTTGGCCT CACTGGGTCG CAATATCAAC TTTGACCAAA AGCGCTGTGA AGGCTATCGC
AACTTCTGTA ACAAGTTGTG GAATGCGACC CGTTTTGTTT TAATGAACTG CCCTGGCGGA
GATGAAGACA ATGGCTTGGC GCCGTGCGAT AACCAGTGTG GCCCAGAAGG TTATTTAGAT
TTCTCTCCAG CAGATCGTTG GATCGTTTCT TTGCTACAAA GAACAGAAGC CGAAGTAGAC
AAAGGCTTTC AAAACTATCG CTTTGACAAT ATTGCCACCG GCATTTATCA ATTTGTTTGG
GATGAATACT GCGATTGGTA TTTAGAGCTT GCGAAAGTGC AACTGCAAAC TGGCACTCCA
GCACAACAAC GTGCCACTCG CCGTACTCTA TTGCGTGTTT TAGAAACGAT CTTGCGCATG
GCGCATCCAT TGATTCCTTT TATTACAGAA ACCCTCTGGC AAACCGTTGG CCCTAAGTCT
GGAAAAGTGC TAGCTCAACA AACTAAGCAA ACTATTGCAC TCCAACCTTA CCCAATTTCG
CAGCCAGAAA AGATTGATGA GCCAAGTGAA GCATGGGTTG CACAAGTGAA AGCAATTGTC
GACGCTTGCC GTAATTTGCG CGGTGAGATG CAAGTTCCCC CAGGTCAAAA AGTACCCCTT
TGGATTTGCG GTCCACAAGC ATTCTTAGAA AAAGCGACTC CTTATTTAAT GGCCCTAGCC
AAATTAACCG AAGTCAAAGT CTATAGCGAT GAATCGGCTC TTGAAAAAGA TGCTCCAGGC
GCCCCAATTG CTCTAGTCGG CAACATCAAA CTCTTACTTA AGATTGAAGT GGATGTTGTA
GCAGAACGTA TTCGTTTGGG CAAGGAAATC GAGCGCCTGG CCAATGAGAT CACTAAAGCC
CGTAGCAAGC TTGATAACGA AAGCTTCGTA GCACGCGCCC CTGTTGAGGT TGTAGCCCAA
GAAAAGCAGC GTCTTGCCGG CTTTGAGCAA AACCACGATA AGCTTGTTGC ACAATTAGAG
CGCCTCAAAT AA
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| Protein sequence | MPNASNTPNS PAAGSVDELA KSYEPAPIEA YWGPEWERRG IADASMDEGK GNFSIQLPPP
NVTGTLHMGH AFNQTIMDGL VRHARMAGKN TLWVPGTDHA GIATQIVVER QLDAQKVSRH
DLGREKFLEK VWEWKETSGS TITRQIRRLG ASIDWGKEYF TMDSKMSKAV VEVFVRLHEQ
GLIYRGKRLV NWDPVLGTAV SDLEVVSEEE DGSMWHIRYP LADGSGHLTV ATTRPETLLG
DVAVMINPED ERYKHLIGKL VNLPLCDRQI PIIADDYVDV NFGTGVVKVT PAHDFNDYAV
GQRHQLPLIN ILTLDAKINE NAPATYQGLE RFAARKQVVA DLEAAGLLEK VQPHKLMVPR
GDRTQTIIEP MLTDQWFVAM SKPSQDNQYQ PGSSIAGAAL DAVTKGDIKL VPENWINTYT
QWLENIQDWC ISRQLWWGHQ IPAWYGEDGQ IFVARSEEEA KTKAVAAGYT GQLNRDPDVL
DTWFSSALVP FSSLGWPEET PALNHFLPSS VLVTGFDIIF FWVARMVMMT CHFTGKVPFH
TVYVHGLVRD AEGQKMSKSK GNTLDPIDLI DGIKIEELVN KRTTGLMNPK QAESIGKKTK
KEFPDGIPAF GTDALRFTFA SLASLGRNIN FDQKRCEGYR NFCNKLWNAT RFVLMNCPGG
DEDNGLAPCD NQCGPEGYLD FSPADRWIVS LLQRTEAEVD KGFQNYRFDN IATGIYQFVW
DEYCDWYLEL AKVQLQTGTP AQQRATRRTL LRVLETILRM AHPLIPFITE TLWQTVGPKS
GKVLAQQTKQ TIALQPYPIS QPEKIDEPSE AWVAQVKAIV DACRNLRGEM QVPPGQKVPL
WICGPQAFLE KATPYLMALA KLTEVKVYSD ESALEKDAPG APIALVGNIK LLLKIEVDVV
AERIRLGKEI ERLANEITKA RSKLDNESFV ARAPVEVVAQ EKQRLAGFEQ NHDKLVAQLE
RLK
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