Gene Pnuc_1714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1714 
Symbol 
ID5051945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp1781680 
End bp1782456 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content44% 
IMG OID640471887 
Productputative transmembrane protein 
Protein accessionYP_001156491 
Protein GI145589894 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTGA ACTCGTTAGC GCCTAAGGAA GGCTATACCT GGATTAGACA AGGTATCTGG 
CTTTTTAAAC AAAATCCTTT GGGATTTTTA ATGCTCATTT TTATGTATGT TTTTGTGGCG
CAGATAGCGA TCATGGTTCC GGTGATCGGG GTATTCGTAG TCTTACTGCT TACGCCCGCT
ATATCAGTTG GATTTTTAAC CGCCTGTCGT CAAGCAATTC AAAAGGAGCG TATTCGCCCC
TTAGTCTACT TAGCGGCCCT CCAATCCGGA GTGTTAGTGC GTCGTCGCAT TTTGCAATTA
GGGTTGATCT ATACAACACT GATTCTTGTG TTGAGTTTTA TTCTCAGCCT CTTAATTGAT
TTTGAAGCGC TGCTTCCGCT AATCACGAGT GATAAACCAA TCACCCCAGA ATCACTGCAC
CAAATCTATT TGATTCTTTT CTTTGGTGCC ATCCTCTACA TTCCGGTAGC GATGTTGATG
TGGTTCTCTC CAATATTGAT TGCTTGGGCA GACATGTCTA TTCCGCAGGC ACTTTTTTCT
AGCTGGATGG CATGCTGGGT TAACCGCACT GCATTCTTTT TCTACCTAGC AATCTGGAGT
ATTGTTCTAA TCGCCATTCC ATTAACGATT GGCATGTTGT TAGACGCCCT GGATTTAGGT
CAAGCGGCTT CTTTCATCGT CGCACCTATT TCCATAGCAG GCTTAACAGT GATGCACTGT
TCGTTTTACG CCACCTGGAA AGCGTGCTTT ACCGAAGATG AAGTGGCACT GGTTTAG
 
Protein sequence
MKLNSLAPKE GYTWIRQGIW LFKQNPLGFL MLIFMYVFVA QIAIMVPVIG VFVVLLLTPA 
ISVGFLTACR QAIQKERIRP LVYLAALQSG VLVRRRILQL GLIYTTLILV LSFILSLLID
FEALLPLITS DKPITPESLH QIYLILFFGA ILYIPVAMLM WFSPILIAWA DMSIPQALFS
SWMACWVNRT AFFFYLAIWS IVLIAIPLTI GMLLDALDLG QAASFIVAPI SIAGLTVMHC
SFYATWKACF TEDEVALV