Gene Pnuc_1712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1712 
Symbol 
ID5052471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp1780253 
End bp1780666 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content48% 
IMG OID640471885 
Productputative transmembrane protein 
Protein accessionYP_001156489 
Protein GI145589892 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.269787 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCATG CTATAACAAA TTTATTTAGC CAAACCCTTA ATCACGGTCT AGCTCTCATG 
AGCTTTTTAG TGGTTTTTGG CCTTTTTGGA CTCGGATCAG CACAAGCTCA GAATACCAGC 
CAAGCACTCA GCCAGTCCGA GCTCAATCAA ATTAACAACC AGCCACTTGC CCCAACGGTA 
AGCCCATCAA ACACCCTCGA TGCGCCTGCA AAGCGAAAGC CAAGCTTCCA ACATAAGGAA 
GCTACCGGCA CTGAGGTTAC TGAGTACAAA GATGCCAACA GCCCAACTCA AGTGCAAGTC 
AAAACGAAGT ACACCAGCTA TGAGATGTCT CCTCCTGACT CAGTTCAGCC TGGCCCTGCA 
ACCTCAGGCG AAGGTGAGCT TTTAAGTGTG CCGAGCATTA GCATTCCTTT TTAA
 
Protein sequence
MMHAITNLFS QTLNHGLALM SFLVVFGLFG LGSAQAQNTS QALSQSELNQ INNQPLAPTV 
SPSNTLDAPA KRKPSFQHKE ATGTEVTEYK DANSPTQVQV KTKYTSYEMS PPDSVQPGPA 
TSGEGELLSV PSISIPF