Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_1710 |
Symbol | |
ID | 5053963 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | - |
Start bp | 1776448 |
End bp | 1777323 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640471883 |
Product | carboxymethylenebutenolidase |
Protein accession | YP_001156487 |
Protein GI | 145589890 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0412] Dienelactone hydrolase and related enzymes |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGAAA AATCGAGTAA CGCACGTAGA GAGTTTATTA AGACGTCTGT CATTGGTGCT ACGACCATGG GCGTAGGTTT TGTGGCTGCA TCAGACCCTG TGTTGGCCGC CGCCATTGAA ACTGACTTTA CGGGGCTCAA AGCTGGTGAA CAAATGATTC CAGTGGGAAG CTTTCAGTTG CCTGCCTATG TTTCACGTCC TGCTTATGCC AAAGGCTCTT TACCTATTGT CATTGTCGTA AGTGAAATCT TTGGCGTGCA TGAATACATT GCTGATGTGA CCCGCCGTTT TGCGAAGTTG GGTTATTTGG CGATCGCTCC TGAGTTTTTT ACTCGCGCGG GAGATCCCAA TGCCTACGGC ACTATTGCCG AAATTCAAGC CAATATCGTT GCTAAAACTC CTGATACACA AGTGATGAAT GATTTGCAGG CTGCCTTGGT GTGGGCTGGA AAAAATGGTG GCGACCTGAA GCGAGTGGGG GTCACTGGAT TTTGTTGGGG CGGCAGAATT ACCTGGCTGT CAGCAACCTT GCCACAAGTG CGTGCAGGAG TTGCTTGGTA TGGTCGCTTG ATTGGCGAGA AGACCGAGGG CAATCCACGT CACCCCGTGG AAATTGCCGC TGATTTAAAA GCGCCAGTAC TGGGTTTATA TGGTGGCGCT GATACTGGCA TCTCCTTGGA AAGTGTCGAG CAAATGCGCG CTGCATTGGC GCAAGCTGCC GCTAAAAATC CCGCTGCGAA AGCCTCTCAA ATTGAGGTTT ATCCCGATGC ACCACATGCA TTCCATGCGG ACTATCGCGC TAGCTATCGT GAGGGCCCCG CTAAAGATGG ATGGGAAAAG TGCATCGCCT GGTTTAAGAA AAACGGAGTA GTGTAA
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Protein sequence | MSEKSSNARR EFIKTSVIGA TTMGVGFVAA SDPVLAAAIE TDFTGLKAGE QMIPVGSFQL PAYVSRPAYA KGSLPIVIVV SEIFGVHEYI ADVTRRFAKL GYLAIAPEFF TRAGDPNAYG TIAEIQANIV AKTPDTQVMN DLQAALVWAG KNGGDLKRVG VTGFCWGGRI TWLSATLPQV RAGVAWYGRL IGEKTEGNPR HPVEIAADLK APVLGLYGGA DTGISLESVE QMRAALAQAA AKNPAAKASQ IEVYPDAPHA FHADYRASYR EGPAKDGWEK CIAWFKKNGV V
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