| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1699 |
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| Symbol | |
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| ID | 5053237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1765674 |
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| End bp | 1767611 |
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| Gene Length | 1938 bp |
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| Protein Length | 645 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640471872 |
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| Product | DNA primase |
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| Protein accession | YP_001156476 |
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| Protein GI | 145589879 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0358] DNA primase (bacterial type) |
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| TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACTCA TCCCGCAATC CTTCATTGCC GATCTTTTAA ATCGGGTAGA CATCGTTGAT
GTGGTTGGGC AGCACGTGAA GTTAAAAAAG GCAGGCGCAA ACTATCAAGG TCTGTGCCCC
TTTCATTCAG AAAAATCTCC TTCGTTTTCC GTATCACCAA CAAAACAGTT TTATCACTGC
TTTGGTTGTG GTGCGCATGG CTCTGCCATC AGTTTCATGA TGGAGTATTC CGGTCTAGGG
TATGTAGATT CGATTGAAGA GTTGGCGCGT TCTGCTGGTT TAGATGTTCC GCGGGAAGAG
CGGGCTGCCA ATGACGTAGC CCGCCAACAG CAAGCCATGG CCTTAAGTGA AGTTATGAGT
TCTGCCGCAG ATTGGTATCG CCAGCAACTC AAAGGCAATA CTCGCGCAGT GGAGTACTTA
AAAGGTCGCG GCCTTACTGG AGAAATTGCT AAGCGCTACT CATTAGGTTA TGCCCCAGAT
GGTTGGCAAG GTCTTGAGGC CGTATTTGGT CCCTATAGCA ATGATGAGGT GGCAAAGACC
TTGGTGGAAG GTGGCTTAAT CATTCAGGGT GAGCAGGCTG AAGGGGCTCC AGTAAAGCGC
TACGATCGTT TTCGCGATCG AGTGATGTTC CCAATTCGTA ATCCCAAGGG TCAAACCATT
GGCTTTGGTG GACGCATTTT GGATCAGGGC GAGCCAAAGT ATTTAAATTC TCCAGAGACC
CCTTTGTTCT CTAAAGGCAA CACTCTGTAC GGTTTGTTTG AGGCAAGACA AGCGATACGC
GCGCAAGAAT ATGTATTGGT GTGTGAAGGC TATATGGATG TGGTTGCTTT GGCCCAATTG
GGATTTCCGA ATGCCGTAGC AACCTTGGGT ACAGCATGTA CTGCAAACCA TGTGCGGATG
TTGTTACGTC AAACTGATCG CATCGTGTTT TCATTTGATG GCGACTCTGC CGGTCAACGC
GCAGCGCAGC GCGCTCTTGA GGCTTGCTTG CCGCTCATGT CCGACGATAA AGAAATTCGT
TTCTTATTCC TTCCGACTGA GCATGACCCC GATAGTTATG TGCGGGCGTA CGGCGCACCA
GCCTTTGAAA AAGTCATCAA AGAGGCGATG TCAATTTCTA GTTTCTTTTT CAAGATTGCT
AGTGAAGGCC ATGAGCTCAC TACCCCAGAG GGTAGAGCCC ATACGCATCA CGCTGCTAAG
CCTTTGCTCT TATCGATGCC ACCGATTGCA CTGCGCACAC AAATATTGCG CGAGCTCGCC
ATTAGAACGA ATACCACCCC TGCTGAATTA GAAGCATTTT GTGGTTTAAC GGTAGTGCCA
GCGCCAGTCC AAAAACAAGC GTATCAACCG ACCCAAGCCC GTTCACAAAA TAATTTTTCC
AATACGGGAA ATAGACAGGG TGCACCATGG CAAGCATCTA AAGGTTCAGC AAAACGGGTT
GCACAAAATA TTGAGCCTCC TAAAGCGCCG ACTGATTTAG CAGAACAAAT GTTGCGTGTC
TTGATACAGT TTCCGCATTT AGGAAAAGCA TTGGATGGCA ATAAACGCAC GCTCGCCTTG
AAGGCAGCAG AGCAACGCTC TACTAAAGCG CATGCCCTAA TGCAAGATCT TTTATCGCAA
TGTGATTTAG TGGAGTTGGT ACCTGGTGAT GCTGGTAAGC CGGCCAGTGT TGGCGCAGGT
TCATTTGCAA TGTTCCAGGA TCAACTGTCT CGTAGCGAGC TCGCACCTTT GTATGAAGTA
CTCAGAAAAC GGGTGATGGA CTCAGATTTG GATCTAGATG GAGCGGTGGC GGATCTGGAT
GGGGCCTTCA AAAAACTGGA ACTGACTCAT CTCAAGCAGG AAATGACAGA AATCACCCAG
CGACTCTCTG GCGGGACTGC AACCGAGCAA GATCGGGCGC GTTACCGTGA ATTAGGCGAA
AAGCTGAAAT TCTCTTAA
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| Protein sequence | MALIPQSFIA DLLNRVDIVD VVGQHVKLKK AGANYQGLCP FHSEKSPSFS VSPTKQFYHC
FGCGAHGSAI SFMMEYSGLG YVDSIEELAR SAGLDVPREE RAANDVARQQ QAMALSEVMS
SAADWYRQQL KGNTRAVEYL KGRGLTGEIA KRYSLGYAPD GWQGLEAVFG PYSNDEVAKT
LVEGGLIIQG EQAEGAPVKR YDRFRDRVMF PIRNPKGQTI GFGGRILDQG EPKYLNSPET
PLFSKGNTLY GLFEARQAIR AQEYVLVCEG YMDVVALAQL GFPNAVATLG TACTANHVRM
LLRQTDRIVF SFDGDSAGQR AAQRALEACL PLMSDDKEIR FLFLPTEHDP DSYVRAYGAP
AFEKVIKEAM SISSFFFKIA SEGHELTTPE GRAHTHHAAK PLLLSMPPIA LRTQILRELA
IRTNTTPAEL EAFCGLTVVP APVQKQAYQP TQARSQNNFS NTGNRQGAPW QASKGSAKRV
AQNIEPPKAP TDLAEQMLRV LIQFPHLGKA LDGNKRTLAL KAAEQRSTKA HALMQDLLSQ
CDLVELVPGD AGKPASVGAG SFAMFQDQLS RSELAPLYEV LRKRVMDSDL DLDGAVADLD
GAFKKLELTH LKQEMTEITQ RLSGGTATEQ DRARYRELGE KLKFS
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