| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1677 |
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| Symbol | |
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| ID | 5053898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1740755 |
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| End bp | 1742935 |
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| Gene Length | 2181 bp |
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| Protein Length | 726 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640471850 |
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| Product | heavy metal translocating P-type ATPase |
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| Protein accession | YP_001156454 |
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| Protein GI | 145589857 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01512] heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAAT GCAATACCTC CTGTAGTTGT TCTGCATCAA CTCCTGTGAC AAAGGCTTCT
GAGATGCCGA GCAAGAATAA GGCCATCTAT CGCATTGAAA ATATGGACTG TCCAACTGAA
GAGGCGCTTA TTCGCAAAAA GCTAGCGAGT GTAAGCGGCA TTGAGTCGCT GGACTTTAAC
TTAATGCAAA GGATGCTCAC GGTTGGTCAC AATCTCAACT CACTTGACGC TATCGAGTCC
GCTTTGGGTT CAATTGGAAT GCAGGCGGTG CTACAAAGTG GTGAGACTTC TACAAAGGGC
GGCTCGATTG AGCCTATGCC TAAAACCAAT TGGTGGCCAT TAGCTGTTGC AGGTATCACT
GCAACCTTGG CTGAAATCAT GGAATTGCTG CAACTTGGTA ATCAGTGGAT TGTCATCACT
CTAGTAATCG CCTCAATTGC TTCGGGGGGC CTGACCACTT ATAAAAAGGG CTGGATTGCA
TTAAAGAATA GCAATCTCAA TATCAATGCC TTAATGTCAA TTGCAGTCAC AGGCGCGATG
GCGATTGGAA GTTGGCCAGA AGCCGCCATG GTGATGTTCT TATTTACTCT AGCTGAAGTA
ATTGAAGCCA AGTCATTAGA TCGTGCTCGT AATGCGATTC GTGGCTTATT AGACCTCACC
CCTGAAACCG CAACCGTTCA GCAAGCCGAT GGCTCTTGGG TGCTAACGGA TGTAAAGGCT
ATCGCTTTAG GTGCTTTAGT TCGAGTGCGT CCTGGAGAGC GAATAGCTTT AGACGGCATA
TTAATAAGTG GTAACTCGGC AGTAAATCAA GCGCCAATCA CGGGTGAGAG CCTACCCGTC
GATAAGATAG TTGGCGATGA GGTATTTGCA GGAACGATCA ATCAGACGGG ATCATTCGAA
TACAAAGTTA CTGCAGAAGC GACTCATTCA ACGCTAGCTC GAATTATTCA TGCAGTTGAA
GCAGCGCAAG GAAGTCGTGC GCCCACCCAG CGTTTTGTTG ATCAATTCGC CAAGATCTAT
GCGCCAGCTA TTTTTTTGCT TGCGGTGTTA GTCGCTGTTT TGCCTCCATT GTTAATGGCG
CAGTCATGGC AGGAATGGAT CTATAAAGCA TTAGTCATGT TAGTGATTGC CTGCCCTTGT
GCTTTGGTGA TCTCAACACC TGTAACGATT GTGAGTGGCT TAGCAGCCGC TGCAAGAAAA
GGCATCTTAA TTAAAGGAGG TGCTTTTTTA GAAGCAGGAC GGAGCATGAA GGTCTTAGCG
CTCGATAAGA CGGGGACGCT CACCTACGGG AAGCCTGCAC AAACGGACTT TTTTGTATTA
AGTGGCAATG ACAAGTATAT TCACGAAATT GCTATCAGTC TTGCGGCACG ATCTGATCAT
CCCGTATCTC TAGCAATTGC CCATGCTAAT CAAGAGCAAA AGAATGATTT AAAGACTGTG
GATAGCTTTG AGGCGATTCT GGGTCGCGGA GTCAAAGGCG TTATTGAAGG TAATTTGTAT
TACCTTGGCA ATCATCGACT GATTGAAGAA TTGGGTTTGT GCTCTGATGA TATTGAGAAT
CGTTTATTAC CATTAGAGCA GCAAGGCAAA ACGGCCGTAT TGCTTACCAA CCAAACAGAG
GTTTTAGCCA TTATTGCGGT AGCCGATACT GTTAGAGAAA CAAGCAAGCA GGCTATTGAT
GAGCTTCACC AATTAGGCGT GACTACCATC ATGCTCACTG GTGACAATCA GCACACCGCT
AAGGCAATAG GTAAACAGGT GGGTGTCGAT GAGATTATGG GTAATTTATT GCCTGAAGAT
AAGCTTAAAA TAATTGACAG TCGCCTAAAA AAGGATCCCA ATGTAAAGGT AGGCATGGTT
GGAGATGGCA TTAATGATGC CCCTGCTTTA GCAAGAGCAA GTATTGGATT TGCGATGGGG
GCGGCTGGAA CCGATACTGC GATAGAGACT GCTGATGTTG CGCTAATGGA TGATGATTTA
CGCAAGATTG CTACCTTTAT TCGGCTATCC AAATCAACCG CTCTAATTCT GACTCAAAAC
ATTGTTCTTG CTCTAGGCAT TAAGGCTATC TTCCTTGTGC TTACCTTTAC AGGGCAAGCC
ACGATGTGGA TGGCGGTATT TGCGGATATG GGTGCGAGCT TGCTAGTGGT GGCAAATGGA
TTGCGGTTAT TAAGAAGCTA G
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| Protein sequence | MSECNTSCSC SASTPVTKAS EMPSKNKAIY RIENMDCPTE EALIRKKLAS VSGIESLDFN
LMQRMLTVGH NLNSLDAIES ALGSIGMQAV LQSGETSTKG GSIEPMPKTN WWPLAVAGIT
ATLAEIMELL QLGNQWIVIT LVIASIASGG LTTYKKGWIA LKNSNLNINA LMSIAVTGAM
AIGSWPEAAM VMFLFTLAEV IEAKSLDRAR NAIRGLLDLT PETATVQQAD GSWVLTDVKA
IALGALVRVR PGERIALDGI LISGNSAVNQ APITGESLPV DKIVGDEVFA GTINQTGSFE
YKVTAEATHS TLARIIHAVE AAQGSRAPTQ RFVDQFAKIY APAIFLLAVL VAVLPPLLMA
QSWQEWIYKA LVMLVIACPC ALVISTPVTI VSGLAAAARK GILIKGGAFL EAGRSMKVLA
LDKTGTLTYG KPAQTDFFVL SGNDKYIHEI AISLAARSDH PVSLAIAHAN QEQKNDLKTV
DSFEAILGRG VKGVIEGNLY YLGNHRLIEE LGLCSDDIEN RLLPLEQQGK TAVLLTNQTE
VLAIIAVADT VRETSKQAID ELHQLGVTTI MLTGDNQHTA KAIGKQVGVD EIMGNLLPED
KLKIIDSRLK KDPNVKVGMV GDGINDAPAL ARASIGFAMG AAGTDTAIET ADVALMDDDL
RKIATFIRLS KSTALILTQN IVLALGIKAI FLVLTFTGQA TMWMAVFADM GASLLVVANG
LRLLRS
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