| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1665 |
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| Symbol | |
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| ID | 5052460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1727673 |
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| End bp | 1728953 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640471838 |
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| Product | major facilitator superfamily metabolite/H(+) symporter |
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| Protein accession | YP_001156442 |
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| Protein GI | 145589845 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATATA CATTAGAAGA AAAACGTAAA AGAATATTCG CAATATTTGC AGCATCTTCC
GGTAACCTTG TCGAGTGGTT TGATTTTTAT ATATATGCTT TTTGCGCAAT ATATTTTGCC
CATATATTTT TTCCTACGGC CAACCCTACT GTACAGCTAC TCAATACGGC TGGCGTGTTT
GCAGCAGGTT TTTTGATGCG ACCTATCGGG GGGTGGATTT TTGGGCGTAT TGCCGACCGT
CATGGCAGAA AAAAGTCTTT GGTAATTTCT GTGATGATGA TGTGCGCTGG CTCTTTGACG
ATTGCGTGTT TACCTGGTTA TGACATTATT GGTATTTGGG CCCCAGCCTT ACTATTATTA
GCAAGGCTGT TTCAGGGTCT TTCTGTGGGC GGGGAGTACG GAACCACAGC GACCTATATG
AGTGAAATTG CAATGAAGGG GCAAAGAGGT TTTTATTCAT CCTTTCAATA TGTCACCCTG
ATTGGCGGTC AGTTGTTGGC TGTTTTAGTA ATTTTAATTC TGCAACAATT TTTAGACGAA
AGCCAGCTAA AAGAATGGGG GTGGAGAATT CCATTTGTTA TCGGGGCATT TGCGGCAGTG
ATCGCGCTCT TATTGCGAAA AACTCTCTCA GAGACAGCAT CTAACCTATC AGAATTAAAC
AAGGACGCCG GCAGTATCAA GGCTTTATTT CGAGATCATA AAAAGGCATT TTTTACTGTC
TTAGGCTATA CGGCAGGGGG CTCCTTAAGT TTTTACACAT TCACAACCTA TATGCAAAAG
TATTTAGTGA ATTCAGTGCA TATGTCTATA AAGACTGCTA GCGCTGTCAT GACTGGATGT
TTATTGGTTT ATATGTTGAT GCAGCCTCTA TTTGGGGCCC TGTCAGATCG TATAGGTCGA
AGAAATAATA TGCTGCTCTT TGGCGGCTTA GGCGTACTTT TTACGATTCC AATTATGGTC
GTTCTCCAAG GAGTTTCTGA CGCCTGGATA GCTTTTTTGG TTATCACCTT TGCATTGGGG
ATCGTCAGTT TCTATACGTC AATTGCCGGA ATAGTTAAGG CGGAGATGTT CCCTCCGGAG
GTCAGGGCTT TAGGTGTCGG CTTGTCTTAT GCCATTGCTA ATGCAATCTT TGGAGGCACT
GCTGAATTTG TAGCTCTAAG TTTTAAAGCA GAGGGATATG AATCAATGTT TTACTGGTAT
GTCACTGGAA TGTTGGGGCT AGCTTTTTTG GTTAGCTTCC GGCTACCAAG AAATGCGCCT
TACTTGCTCA ATGACCATTG A
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| Protein sequence | MTYTLEEKRK RIFAIFAASS GNLVEWFDFY IYAFCAIYFA HIFFPTANPT VQLLNTAGVF
AAGFLMRPIG GWIFGRIADR HGRKKSLVIS VMMMCAGSLT IACLPGYDII GIWAPALLLL
ARLFQGLSVG GEYGTTATYM SEIAMKGQRG FYSSFQYVTL IGGQLLAVLV ILILQQFLDE
SQLKEWGWRI PFVIGAFAAV IALLLRKTLS ETASNLSELN KDAGSIKALF RDHKKAFFTV
LGYTAGGSLS FYTFTTYMQK YLVNSVHMSI KTASAVMTGC LLVYMLMQPL FGALSDRIGR
RNNMLLFGGL GVLFTIPIMV VLQGVSDAWI AFLVITFALG IVSFYTSIAG IVKAEMFPPE
VRALGVGLSY AIANAIFGGT AEFVALSFKA EGYESMFYWY VTGMLGLAFL VSFRLPRNAP
YLLNDH
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