Gene Pnuc_1661 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1661 
Symbol 
ID5053445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp1722903 
End bp1724141 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content44% 
IMG OID640471834 
Producthypothetical protein 
Protein accessionYP_001156438 
Protein GI145589841 
COG category[S] Function unknown 
COG ID[COG1262] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03440] conserved hypothetical protein TIGR03440 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACAATA AAGTCTTTCC TCAATCGCTT TCAGCAAATG AAGTACTAGA GCAATTTCAT 
CGCTCCAGAA AATACTCAAC AGACCTCATA GTTGGGCTGA GCGCTGAAGA CTGTCAAGCC
CAATCGATGG AGGATGCTAG CCCTGCTAAA TGGCATTTGG CACATGTCAC TTGGTTTTAT
GAGGTCATGG TACTCAAGGC TTTTGAAGAC AACTTTTCTT TCTGGAATCC GGAGTTTGCC
GTTTTATTTA ATAGCTATTA CAACGGTATT GGGGATAAGC ACCCACGCAG TAAAAGAGGC
CTCTTAACGC GACCTTCTCT AGCGGAAGTC CTAGAGTGGC GCAAGAATAT TGAAGATCGC
GTTTGCAAAC TCATCAAAGC AAAAAATTCC CCAGAATTAC TTTGGTTAAT TCAGGTTGGC
ATTAACCACG AACAGCAACA CCAAGAATTG CTATTAACCG ATCTACATCA TCTATTCTCC
AATAACTCGC TTTTCCCGGT TTATTCCTCT CTGGTCAAGA ATATATCGAC TGCTGTAGCA
CCCTTTCAAT GGGTAGAAGG TATGAGTGGG CTGGTAGAGA CAGGCTATGA AGGCGAACAA
TTTCATTTTG ATAATGAAGG GCCTAAACAT CAAGCCTTTA ATCAAATTCA CTCAATCGGC
AATCGATTGG TTAGTAATGC AGAGTGGCTT CAATTTATTG AAGATGGTGG CTACCAAAAT
TTCCAATGGT GGCTAGATGC AGGTTGGGCA TGGCTTCAGT CAGAACAGAT CTCTGCTCCG
CTGTATTGGA ACAAAGAAGG TCAAGATCAG CTATTACGAT TTTCACTTAA TGGCAATCTA
CCACTTGATC TTTATGCGCC TGTATCAAAC ATCAGCTATT TTGAAGCAGA TGCTTTTGCA
CGCTGGGCTA GCCAGAACCT AAGCGGGTTT GCTGGTGCCC GCCTTCCCAC TGAATTTGAA
TGGGAGGCTT TTGCGAGATT AAATCCTGAG TCAAGCAATG ATCTTTTTGG CAAAGTCTGG
CAATGGACTA GTAGTAACTA CAATCCTTAC CCCGGGTATC AGCCATGGGG CGGAATTGCA
GGCGAGTACA ACGGTAAATT TATGGTCAAT CAAATGGTTC TCAGAGGTAG CTCTGAGTAC
ACGCCTTCTG ATCACTCCAG AATCAGTTAT CGAAATTTTT TCCCAACCCA TGCTCGTTGG
CAAATGACGG GCTTAAGGCT TGCTAAAGAT GGTCTTTGA
 
Protein sequence
MHNKVFPQSL SANEVLEQFH RSRKYSTDLI VGLSAEDCQA QSMEDASPAK WHLAHVTWFY 
EVMVLKAFED NFSFWNPEFA VLFNSYYNGI GDKHPRSKRG LLTRPSLAEV LEWRKNIEDR
VCKLIKAKNS PELLWLIQVG INHEQQHQEL LLTDLHHLFS NNSLFPVYSS LVKNISTAVA
PFQWVEGMSG LVETGYEGEQ FHFDNEGPKH QAFNQIHSIG NRLVSNAEWL QFIEDGGYQN
FQWWLDAGWA WLQSEQISAP LYWNKEGQDQ LLRFSLNGNL PLDLYAPVSN ISYFEADAFA
RWASQNLSGF AGARLPTEFE WEAFARLNPE SSNDLFGKVW QWTSSNYNPY PGYQPWGGIA
GEYNGKFMVN QMVLRGSSEY TPSDHSRISY RNFFPTHARW QMTGLRLAKD GL