| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1657 |
|---|
| Symbol | |
|---|
| ID | 5051902 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009379 |
|---|
| Strand | + |
|---|
| Start bp | 1719827 |
|---|
| End bp | 1720768 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640471830 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001156434 |
|---|
| Protein GI | 145589837 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCAATA TCCTTTCGAT TTCCCATCTT TATAAAACCT ATCAATCTGG CTTTGAAGCT
CTAAAAGATA TCAATTTAGA GATATCTAAA GGTGAAATCT TTGCTCTACT TGGCCAGAAT
GGTGCAGGAA AAACCACTCT CATCAGCATC ATTTGCGGGA TTGTTAGTCC CACAAGTGGT
CAGGTATTGG TGGATGGCAA GGACGTCATC CACAATTACC GCGAAGCTAG GGAGTTAATT
GGCCTAGTGC CTCAAGAGCT TGCAACGGAC TCTTTTGAGA CTGTATGGAA CACCGTGACC
TTTAGTCGAG GCCTTTATGG GAAATCCCCT AACCCAGCCT TCATTGAGAA AATTCTGAAG
GATCTATCTT TATGGGATAA GCGCGATAAT AAAATTATGA CCCTCTCTGG TGGTATGAAG
CGGAGAGTCA TGATTGCCAA AGCCCTCTCT CACGAACCCA GCATCCTCTT TTTGGATGAG
CCTACTGCTG GGGTTGATGT CAGCCTCAGA AGGGACATGT GGAACTTGGT CAAAGTTCTT
AAAGACAATG GAACCACCGT CATTCTGACA ACCCACTACA TTGAAGAAGC TGAGGAAATG
GCAGATCGCA TTGGCATCAT TCGTAGTGGC GAACTGATTA TGGTGGACAA CAAACTAGCC
TTGATGAATA AATTAGGCAA AAAAGAATTA ACACTAGAAC TACAAAATCT ATTAAAGAGC
CTTCCTAAGG AGCTTGAGAT GACCGGGTTA AGTCTTTCAG AAGACGGATA TGAGCTCACT
TACCGGTTTG ATTCCAAAGA TGAAGATATC AATATTGCAC AACTGCTGCA AAAAGTGGCT
AGCTTAGGAA TTGTTTTTAA AGACTTACAT ACAAAGCAAA GTTCTCTTGA AGAAATCTTT
GTCAATCTCG TAAATTCAGG GGCCACTACC CATGAAGCTT AA
|
|---|
| Protein sequence | MINILSISHL YKTYQSGFEA LKDINLEISK GEIFALLGQN GAGKTTLISI ICGIVSPTSG
QVLVDGKDVI HNYREARELI GLVPQELATD SFETVWNTVT FSRGLYGKSP NPAFIEKILK
DLSLWDKRDN KIMTLSGGMK RRVMIAKALS HEPSILFLDE PTAGVDVSLR RDMWNLVKVL
KDNGTTVILT THYIEEAEEM ADRIGIIRSG ELIMVDNKLA LMNKLGKKEL TLELQNLLKS
LPKELEMTGL SLSEDGYELT YRFDSKDEDI NIAQLLQKVA SLGIVFKDLH TKQSSLEEIF
VNLVNSGATT HEA
|
|---|
| |