Gene Pnuc_1654 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1654 
Symbol 
ID5053076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp1717484 
End bp1718113 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content43% 
IMG OID640471826 
Product2OG-Fe(II) oxygenase 
Protein accessionYP_001156431 
Protein GI145589834 
COG category[L] Replication, recombination and repair 
COG ID[COG3145] Alkylated DNA repair protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCAAA GCTCCTTATT TAGCATCGAC TCAGATCTTT GCGCTACAAA TCTACTACCT 
AAAGAGGGGC TCGTTAACTA CTATCCAGAA TTTCTAGGTG AAGTAGAAAG CCTTAACCTA 
CTGAATCAAC TGCAAAAGTC TCTGCAATGG GAGGCGGATC AACTCATCAT ATTTGGGAGA 
TTAATCAGCA CCCGCCGCAA GGTGGCTTGG ATTGGTGACC CAAAATGTAC TTACACCTAC 
TCGGGAGTAA AAAAACAACC TCAATCCTGG ACGCCAGAAT TACTGATTAT TAAAAGGCAA 
CTAGAGGAAC TGCCCCAGGC AGAATTTAAT TCATGCTTAC TTAATTTCTA CCACGATGGG 
GCCGATGGCA TGGGGTGGCA TAGTGATGAT GAAAAAGAGT TAGATGCGCA ATCCCCTATT 
GCTTCGCTGA GCCTTGGCTC TGCACGTAAA TTTTCTTTTA AGCACAAAAA AGATAAATCA 
ACCACCTCCC TCTTTCTAGA AAATGGTAGC GCTCTCATCA TGCACGCACC TACTCAACAA 
TTTTGGCAGC ATGCGCTTCT CAAAACCAAA ACCATTCATA CGCCTCGTAT CAATTTAACC 
TTTAGACGAA TATCCATCAG CAATGCATAA
 
Protein sequence
MNQSSLFSID SDLCATNLLP KEGLVNYYPE FLGEVESLNL LNQLQKSLQW EADQLIIFGR 
LISTRRKVAW IGDPKCTYTY SGVKKQPQSW TPELLIIKRQ LEELPQAEFN SCLLNFYHDG 
ADGMGWHSDD EKELDAQSPI ASLSLGSARK FSFKHKKDKS TTSLFLENGS ALIMHAPTQQ 
FWQHALLKTK TIHTPRINLT FRRISISNA