| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1647 |
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| Symbol | |
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| ID | 5053689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1712017 |
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| End bp | 1713417 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640471819 |
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| Product | DNA polymerase III, epsilon subunit |
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| Protein accession | YP_001156424 |
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| Protein GI | 145589827 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0322] Nuclease subunit of the excinuclease complex
[COG2176] DNA polymerase III, alpha subunit (gram-positive type) |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGATATTA ATGAGGTCTC GTACCCGGAT TTAGCTTTTG TAGACATAGA AACTACTGGG
TCTCATTTTG ATCGGGATCG CATTACAGAA ATTGGCATCA AAACACTAGC TAACGATGGA
ATTCAGGTGT GGGAACGGTT AATTAATCCC CAAACCTTTA TTCCGCAAAA TATCCAAAGA
CTTACCGGCA TCTCTCCACA AATGGTGGAA GGTCAACCAA GCTTTGATCA GGTTGCGAAA
GAGTTAAAAC AAGAGCTTGA GGGAAAAATA TTCGTTGCTC ACAATGCTCG ATTTGATTAC
GGGTTTATCA AGGCCTCTTT TAAAAGGGTC GGCATCGATT TCAAGCCGAA AGTGTTATGT
ACGGTAAAGC TTTCTAGATT GCTATTTCCA GAGCAGCCTC GCCATAATCT AGATACCATC
ATTAACGCCC ATGGTCTTCA GGTTAGCGCC CGCCATCGTG CGCTGGGCGA TGCAGATTTA
CTGCTGCAGT TTTGGCGTGT TTGTGAAGCC AAGTTTGGGG CAGAAAAGCT CAATGAGGTG
ATCAATCAAC TGATTGGTAA TCCTAGTCTA CCGCCGAATA TAGATAGAGA CTTAATAGAC
TCCATCCCAG ATACTCCTGG TTGTTATATC TTTTACGGCG ATAACAAGAC GCCACTCTAT
ATCGGCAAGA GTATTTCTTT GCGTAATAGG GTCATGGGGC ATTTTCAAGG CGCATTAACA
CAGCGTAAAG AAATGAAGCT CTCTCTGCAA ATTCGAGATA TTGATTGGAT CGAAACCAGT
GGCGAGCTTG GTGCCCTCAT TCTTGAGTCT AGGTTGATTA AAGAACGTAT GCCTAGTATG
AACATTAAGC TACGAAGGTC TAAAGATCTT TGTGGTTGGA GCTTAGTTGA AGATGAGTCG
GGAGTTCTTT TGCCGCAACT AGTGACCCAC CATCAACTAG CTCCCGGTTT GCAAGAGAAT
TTATATGGCT TGTTTTATAG CAAACGAGAG GCGCACTCTT ATTTAAAGGC AATAGCTAAA
AAGCATCATC TTTGCGAGGC ATTGCTTGGC CTAGAGAAGA GGGTCGAGGG TAAATCATGC
TTTGGTTATC AGGTAAAGCA ATGTGGTGGT GCGTGTCTTA ACCTTACCCC AATTACTTTG
CATAATTTGC AATTAAAGAC GGTATTAGAG CTCTTTAAAA TACAGGTATG GCCTTATTCT
GGACCGATCG CAATTAAAGA GGGTGGCGAG ATGATTGTGA TTGATAAATG GTGTTATCTA
GGTACCGCCA TTAATCAAGA TGAGCTGTAT GAGCTGGCTG AATCTGGTGA TGCTGAGTTT
GATCTGGATA TTTACAAGAT AGTTAAAAAA GCCTTATCAG GCGCCTATAA GCAACAAGTG
ATTCATTTCT CAGCTCAATA A
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| Protein sequence | MDINEVSYPD LAFVDIETTG SHFDRDRITE IGIKTLANDG IQVWERLINP QTFIPQNIQR
LTGISPQMVE GQPSFDQVAK ELKQELEGKI FVAHNARFDY GFIKASFKRV GIDFKPKVLC
TVKLSRLLFP EQPRHNLDTI INAHGLQVSA RHRALGDADL LLQFWRVCEA KFGAEKLNEV
INQLIGNPSL PPNIDRDLID SIPDTPGCYI FYGDNKTPLY IGKSISLRNR VMGHFQGALT
QRKEMKLSLQ IRDIDWIETS GELGALILES RLIKERMPSM NIKLRRSKDL CGWSLVEDES
GVLLPQLVTH HQLAPGLQEN LYGLFYSKRE AHSYLKAIAK KHHLCEALLG LEKRVEGKSC
FGYQVKQCGG ACLNLTPITL HNLQLKTVLE LFKIQVWPYS GPIAIKEGGE MIVIDKWCYL
GTAINQDELY ELAESGDAEF DLDIYKIVKK ALSGAYKQQV IHFSAQ
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