Gene Pnuc_1642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1642 
Symbol 
ID5052672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp1708032 
End bp1708688 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content43% 
IMG OID640471814 
ProductDSBA oxidoreductase 
Protein accessionYP_001156419 
Protein GI145589822 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2761] Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.420211 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCAA CCATCAAAAT AGATTATGTA TCAGATGTAG CCTGCCCATG GTGCGCCGTA 
GGCTTAGGAA ATCTCAATCA GGCCATGGCT CAGTTAAGCG ACAAGATTAA TTTTGAAGTC
CACTTTCGCC CCTTTGAACT CAACCCAAAG ATGCCCCATG GCGGTCAAGA TGCCATCGAG
CACCTCACTG AAAAATACGG CTTAACTGCA GAACAGGTCA AAGTAAACCA AGCCAATATT
CGCACTAAAG CATTAGAAGC TGGATTTGCA TTTCATCCAG ATGGTCGTAA ACGGGTGTAC
AACACCTTTG ATGCTCACCG CCTCCTATAT TGGGCCGGTA AAGAATACGA TCTACAAAAA
CAAGCTGCCC TAAAAAAGGA ATTACTGAAT ACTTACTTTT GTCTTGCAGT TAGCTTAGAT
GATCCGGAGA ATGTATTAGA TGCAGTGATG CGTGCAGGAT TAGATAAAGA TAGAGCTCAA
GAAGTACTCA AGGGCAATGA GTACTCAAAA GAAGTGCGGG ATGAAGAGGC AACATATACC
AGTGCGGGAA TCAGCTCAGT TCCCTCGATT ATTATTGATG ATCAATACCT ATTACAAGGA
GCCCAGCCTC CTGAGGCTTT CGTTAATGCG TTTGAGCAAA TTAATAAAAC AATCTAG
 
Protein sequence
MKPTIKIDYV SDVACPWCAV GLGNLNQAMA QLSDKINFEV HFRPFELNPK MPHGGQDAIE 
HLTEKYGLTA EQVKVNQANI RTKALEAGFA FHPDGRKRVY NTFDAHRLLY WAGKEYDLQK
QAALKKELLN TYFCLAVSLD DPENVLDAVM RAGLDKDRAQ EVLKGNEYSK EVRDEEATYT
SAGISSVPSI IIDDQYLLQG AQPPEAFVNA FEQINKTI