Gene Pnuc_1638 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1638 
Symbol 
ID5053550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp1705234 
End bp1706130 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content44% 
IMG OID640471811 
Producthypothetical protein 
Protein accessionYP_001156416 
Protein GI145589819 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.2611 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAATAAAG AAACTAAAGG AATTTGGCTA GGTCTAGTCG GAGTTGTCAT TTTCAGCATG 
ACGCTGCCCG CTACCAAAAT AGCCGTTCCA GATTTTAGTG CGATTCCCCT CTCTTTTTAC 
CGAGCAGCCA TTGCTGGTGT AGCTGCCTTA ATTTATATAG CGGCAAAAAA GATTGCTCTT 
CCCCAAAAGA GTGATCTTCC AACACTGGGA ATCATTTCCA TCCTTATTTC TTTTGTCTTT 
CCAATCTCCA TCGCGATTGC GATGCAAGAT CTGCCTTCTT CACATGGTGG GATTGTTCTA 
GGAATATCAC CTTTATTGAC TGCTCTATTC GCCACCTTGC GTTTTGGCGA AAGACCATCA 
CGCGGCTTTT GGATTACCGC CATTCTTGGT AGTGCTTTAG TTCTCGCCTT CTCAATTAAA 
GAAAGTGGGG GAGCCTTACA GTTAAGTGAT CTAGCCTTGT TACTTGCTGC AGTCTCTGCT 
TCTTACGGTT ATGCAGAAGC TGGTAACCTT TCCCAAAAGA TGGGGGGCAT AGCTGTGATC 
TCATGGGTAG CAATTATTTC CCTCATACCC AGTCTTCCAA TTGCGATTTA TTACGCAATG 
CATTCGAGTG TTACTGCAAT ACCAATCATG AATGCTTCAT TACCAGCATG GCTAGCATTG 
CTCTTTGTAA GCATCTTTTC AGCCTACATC GGTAATATAT TTTGGTACAC CGGATTATCT 
ATGGGCGGAA TATCACATGT CGGACAGGTG CAATTGCTTC AGCCCTTTTG CACCCTAGCC 
CTATCGAGCG TTTTGGTATT CGAACCCCTT ACCATCAGCA ATATCTTCTT TGCTAGCGCC 
GTGCTTGTAG TGGTTGCCAT TGGCAAAAGA ATGCCAGTCG CCAAGGTCAA AACTTAA
 
Protein sequence
MNKETKGIWL GLVGVVIFSM TLPATKIAVP DFSAIPLSFY RAAIAGVAAL IYIAAKKIAL 
PQKSDLPTLG IISILISFVF PISIAIAMQD LPSSHGGIVL GISPLLTALF ATLRFGERPS 
RGFWITAILG SALVLAFSIK ESGGALQLSD LALLLAAVSA SYGYAEAGNL SQKMGGIAVI 
SWVAIISLIP SLPIAIYYAM HSSVTAIPIM NASLPAWLAL LFVSIFSAYI GNIFWYTGLS 
MGGISHVGQV QLLQPFCTLA LSSVLVFEPL TISNIFFASA VLVVVAIGKR MPVAKVKT