Gene Pnuc_1636 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1636 
Symbol 
ID5053250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp1703317 
End bp1704117 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content45% 
IMG OID640471809 
ProductGntR domain-containing protein 
Protein accessionYP_001156414 
Protein GI145589817 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.000195276 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCAAT TTCTAAAACT GGCAGATGTA GAGAATAAGA AGACCCACTT CTCTGCGGGA 
AATCTTGGGA CGCGGATTGC AAACACCCTA CTAAATCAAT TTCATGCGGA TAACTTAAAT 
CCCAATACCC GCCTTCCCTC TGAGTCAGTG ATTGCTAAGC ATTTCAAAGT CAGCAGAACA 
GTAGTACGAG AGGCGATTGC AATACTGAAG AAAGATGAGA TTTTGCAATC ACGTAAAGGT 
AGCGGCACCT TTATTGGCGA AAAATTCAAG CCTAATCCTG AGTTGGTAAA TGAAGTCGCA 
GAACAATCGG TTCATGCTCT GCAAAATATT ATTGAAGTCA GGCGCGGTGT TGAATCTGAA 
ATTGCCGCGT TGGCAGCAAT TCGCCGCACA CCAGGACAAC TTTCAGATAT TGAAGAAGCA 
TTAAGAAAAA TTAAAAAGGT GACTGACGCT GGCCAAAATG GTGTCGAAGA AGATGTCCGT 
TTTCATATGC TGATAGCGCA AGCTACCGGA AATCCTTATT GGCTGAAGTT TGTAGACACT 
TTTTCCTATT CGCTCAGAGC AGCAACTAGT GTTACTCGAG CAAATGAAGA CCGAAGGTTA 
GATTTTGCAC AACAAGTACA AGAAGAACAT GAAGCGATTG TTGCTGCCAT TGCCTCGGGC 
GATGCCGATC AAGCACGTCT AGCTGCCAGT ATCCACATGA TTAACGCAGC GGAGAGGCTG 
AAGCTGGCCG ACAGAAGCTT CTGGAAAGAG GAGGGTAGCG CCTTAGCCAG AGATATCGTG 
GGTAACACCC CACACGATTA A
 
Protein sequence
MSQFLKLADV ENKKTHFSAG NLGTRIANTL LNQFHADNLN PNTRLPSESV IAKHFKVSRT 
VVREAIAILK KDEILQSRKG SGTFIGEKFK PNPELVNEVA EQSVHALQNI IEVRRGVESE 
IAALAAIRRT PGQLSDIEEA LRKIKKVTDA GQNGVEEDVR FHMLIAQATG NPYWLKFVDT 
FSYSLRAATS VTRANEDRRL DFAQQVQEEH EAIVAAIASG DADQARLAAS IHMINAAERL 
KLADRSFWKE EGSALARDIV GNTPHD