| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1634 |
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| Symbol | |
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| ID | 5053319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1700857 |
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| End bp | 1701756 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640471807 |
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| Product | 3-hydroxyisobutyrate dehydrogenase |
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| Protein accession | YP_001156412 |
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| Protein GI | 145589815 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00409497 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTCCC AAGGAATAGC TGTTGGTGTT GTGGGTCTTG GCGCTATGGG TAAAGGAATG
GCTGGATCAT TGCGCCGTTC TGGTTATAAC GTTTATGTAG CCGATGTTCG TAAAGAAGCT
GCTGATACAT TTGTTGAGGA TGGCGGCGTT GCTTGCTCGT CGCCGGCAGA GGTAGCCGAA
CATTGCGAGA TTTTAGTCAG CGTTGTAGTC AATGCTGCGC AAACAGAAGA AGTGCTGTTT
GGTAAAAATG GCGCAGCCAA TGCGATGAAG AAGGGCTCTG TTTTTGTGAT GTGCTCTACA
GTGGATCCTA ATTGGTCCGT TGGATTGGAG AAGCGTTTAA ATGATATGGG GATCCTGTAC
TTAGATTCTC CCATCTCAGG AGGAGCTGCT AAGGCTGCGT CTGGCGAGAT GACTATTATG
AGCGCCGGCA CTCCGCAGGC ATATGCCAAA GTAGGTGGCG CATTAGATGC GATGGCGGCT
AAAGTGTATC GTCTGGGCGA TAGCGCTGGA GCTGGCAGCA AGGTAAAGAT CATTAATCAA
CTATTGGCAG GTGTACATAT TGCAGCCGCT GCTGAAGCTA TGGCTTTAGG GTTGCGTGAA
GGTGTCGATG CTGCGTCTTT ATATGAAGTC ATTACTAATA GCGCTGGTAA TAGCTGGATG
TTTGAGAATC GGATGGCTCA CGTTTTAGCT GCAGACTACA CACCGCTTTC GGCTGTGGAT
ATTTTTGTTA AAGATCTAGG TTTAGTTCTC GATACCGCAA GAGCCAGCAA ATTTCCGCTG
CCCTTGAGCT CCACCGCACA CCAAATGTTC ATGCAAGCAT CTACGGCTGG TTTTGGTAGA
GAAGATGACT CTGCAGTGAT TAAAATTTTC CCTGGAATTG AACTTCCGGG AAAAAAATAA
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| Protein sequence | MSSQGIAVGV VGLGAMGKGM AGSLRRSGYN VYVADVRKEA ADTFVEDGGV ACSSPAEVAE
HCEILVSVVV NAAQTEEVLF GKNGAANAMK KGSVFVMCST VDPNWSVGLE KRLNDMGILY
LDSPISGGAA KAASGEMTIM SAGTPQAYAK VGGALDAMAA KVYRLGDSAG AGSKVKIINQ
LLAGVHIAAA AEAMALGLRE GVDAASLYEV ITNSAGNSWM FENRMAHVLA ADYTPLSAVD
IFVKDLGLVL DTARASKFPL PLSSTAHQMF MQASTAGFGR EDDSAVIKIF PGIELPGKK
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