Gene Pnuc_1626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1626 
Symbol 
ID5053532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp1694400 
End bp1694933 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content45% 
IMG OID640471799 
Productsuperoxide dismutase, copper/zinc binding 
Protein accessionYP_001156404 
Protein GI145589807 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2032] Cu/Zn superoxide dismutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCATGA ATCAAAAACA GTTATTGATC GCATTAACCG CTGTGGGAGT ACTTTCATTA 
CTTGCTTGCC AATCTATGGA GCAAGGCACC GGTCAAAAAG CAAGTGCAAG CCTAGAGTCA
AAGTCAGGAT CTCAGGCAAA GGGCGAGGTT AATTTTGTAT GGCAAGAGAA TGATGTTTTG
ATTAATGGAA AGTTCTCTGG CCTCAAGCCT AATTCTGAGC AAGGAATTCA CGTTCACGAA
AAGGGAGACT GCTCTGCGCC TGATGCTACG AGCGCAGGTG GACATTTCAA TCCAGAAACA
AAAATGCATG GCGTACCTGA TAGCGGCATG AATCATGCTG GAGATATGCC CAACATTAAA
TCGGATGCAA ATGGTAACGC AGTATATGCA GCCAAGTTAC ATGGTTTTGC AGTGAACACA
GGATCCAATG GAATTGTCGG CCGCGCAGTT GTTGTACATA AAGATCCGGA CGATTACAAA
ACCCAGCCTG CAGGTAACTC TGGCCCAAGA ATTGCCTGTG GAGTGATTAA GTAA
 
Protein sequence
MGMNQKQLLI ALTAVGVLSL LACQSMEQGT GQKASASLES KSGSQAKGEV NFVWQENDVL 
INGKFSGLKP NSEQGIHVHE KGDCSAPDAT SAGGHFNPET KMHGVPDSGM NHAGDMPNIK
SDANGNAVYA AKLHGFAVNT GSNGIVGRAV VVHKDPDDYK TQPAGNSGPR IACGVIK