Gene Pnuc_1614 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1614 
Symbol 
ID5052763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp1681366 
End bp1682352 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content44% 
IMG OID640471787 
Productcytochrome d ubiquinol oxidase, subunit II 
Protein accessionYP_001156392 
Protein GI145589795 
COG category[C] Energy production and conversion 
COG ID[COG1294] Cytochrome bd-type quinol oxidase, subunit 2 
TIGRFAM ID[TIGR00203] cytochrome d oxidase, subunit II (cydB) 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCTTG ATATCACTTT AATTTGGGGT GGATTGCTCG CCTTTGTTGT TTTGGCCTAC 
ATTATTTTTG ATGGTTATGA CTTAGGTGTA GGTATATTGA TTCCACTCAT GCGCTCGGAC 
CAGGAGCGGG CTCAGATGCT TAGTTCAGTC AGACTGTGGG ATGCTAATGA AACCTGGTTA 
GTCTTGGGCG GTGGCGGTCT TTTTGCCGTC TTTCCCTTGG CATACTCCAT TATTTTTCCG 
GCGCTCTACC TTCCGCTGAT TGGCATGTTG CTCTCACTAG TGATTCGTGG GGTTGTATCT 
GAATTTCGTT GGCAGAACAA ACAAAGCGCC ATGATTTGGG ACAGTTTATT TTTTGTAGGC 
TCATTCTTGG CAGCCTGTTT TCAGGGAATG ATCTTAGGTG CACTTGTGCA AGGTATTCAG 
GTAGTTGATC ACGCGTATGC GGGTGGACCA TTAGATTGGT TGACACCTTT CTCGGTGATG 
ACTGGGATTG CCTTAGCGCT TGGTTATAGT CTGCTGGGAG CTACTTGGCT TGTATTGAAG 
ACAGATGGAG AATTGCAAAA TAAAGCTTTC TCACTGATTA AGGTATTGGG CTCTCTGATG 
GTGTTAATGG TTGGGGTAGT GAGTCTTTGG ACGCCATTCC TTAAACAAGA TTATTTAAGT 
AGGTGGTTTG CTTGGCCACA AGCAATTTAT GTACTTCCTG TTCCCTTATT ATTGGCAGCA 
GCAATTTTCA TTCTCTTTCG GGCGGTCAAT AGAAGAAATA CTTGGGTACC TTTTGTGGCT 
ACCATCAGCA TCTTTCTTCT GTCTTATATT GGCCTGTTAA TTAGTATTTT TCCATACGTT 
GTTCCTGATA CGATTACCTT GTGGGAGGCT GCAGCTCCGC TCTCGAGCCA GAAATTTTTG 
CTTCCAGGAA CATTGATTTT GGTTCCCATT ATTTTGATCT ACACTACATA CGCACACTGG 
GTGTTCTTGA AGGAAGAGAA AGCATGA
 
Protein sequence
MNLDITLIWG GLLAFVVLAY IIFDGYDLGV GILIPLMRSD QERAQMLSSV RLWDANETWL 
VLGGGGLFAV FPLAYSIIFP ALYLPLIGML LSLVIRGVVS EFRWQNKQSA MIWDSLFFVG 
SFLAACFQGM ILGALVQGIQ VVDHAYAGGP LDWLTPFSVM TGIALALGYS LLGATWLVLK 
TDGELQNKAF SLIKVLGSLM VLMVGVVSLW TPFLKQDYLS RWFAWPQAIY VLPVPLLLAA 
AIFILFRAVN RRNTWVPFVA TISIFLLSYI GLLISIFPYV VPDTITLWEA AAPLSSQKFL 
LPGTLILVPI ILIYTTYAHW VFLKEEKA