Gene Pnuc_1610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1610 
Symbol 
ID5053700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp1677399 
End bp1677746 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content40% 
IMG OID640471783 
Producthypothetical protein 
Protein accessionYP_001156388 
Protein GI145589791 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGGAA AAATTAGACA AAAGCTCATC TCTCGAGAGC CTATCTTGAG CCAGAAATCA 
TTGGTATTAA TCTGTCCTAT TTGCGATCGC CTGATTCCAG AATCCCAAAA GGATGCTCAT 
CATCTGGTAC CCAAATCAAA GGGCGGGAAA ATAACTGAAT ATCTCCACCG TATCTGTCAT 
TGTCAGATTC ATGCTCTCTT TACTGAAACT GAGTTAGCTG TGCAATTGAA TACTGCAGCA 
GCCCTTCAGG AACACCCAGA AATGCAGCGA TTTATTCAGT GGATTAAAAC AAAGCCAAAT 
GACTTTTATG AAAAGTCGAG AAAGAGTGCT CGCTTAAAAG AAAGTTAA
 
Protein sequence
MIGKIRQKLI SREPILSQKS LVLICPICDR LIPESQKDAH HLVPKSKGGK ITEYLHRICH 
CQIHALFTET ELAVQLNTAA ALQEHPEMQR FIQWIKTKPN DFYEKSRKSA RLKES