Gene Pnuc_1609 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1609 
Symbol 
ID5052386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp1677034 
End bp1677303 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content44% 
IMG OID640471782 
Producthypothetical protein 
Protein accessionYP_001156387 
Protein GI145589790 
COG category 
COG ID 
TIGRFAM ID[TIGR03643] conserved hypothetical protein TIGR03643 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCAAAAT TCTCACCCAA AACACTCTCT GCTTCAGATA TCTCGCGCTT AATAGAAATG 
GCCTGGGAGG ATCGCACCCC ATTTGATGCG ATAGAGAAGT CTTTTGGATT ATCTGAGCCT 
CAAGTGATTC AATTAATGCG CCATGAGCTC AAGAGAGGTT CATTTGAACT CTGGCGTAAG 
CGGGTTACTG GAAGAGCAAC TAAGCATGTA GCCTTACGCA GTAAGTTAGT AGATCGCGCT 
TACTGCCCAA CCCAATATAA AAATAAATGA
 
Protein sequence
MPKFSPKTLS ASDISRLIEM AWEDRTPFDA IEKSFGLSEP QVIQLMRHEL KRGSFELWRK 
RVTGRATKHV ALRSKLVDRA YCPTQYKNK