| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1606 |
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| Symbol | |
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| ID | 5053825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 1674614 |
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| End bp | 1675309 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640471779 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001156384 |
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| Protein GI | 145589787 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAATAC TTCCCAAACC CTTTCGCGCT TTAGTGATCG GCTCTTCTGG CACGATTGGA
TTGGCCTTTA TGGAGTTACT TAAAAATAAC CCCTCCTGCT CAGGGGTTGT AGGGGTTCAT
CGTCATTCCG AGCATCCGCT GGATTATCAG AATCCTGAAT CTATTAAAAG TTGTGCTGAG
GCTCTAGCTA GCCAAGGACC ATTTCAACTC ATCATTAATA CGATTGGTGT GCTACACAGC
GGTGAGTGGA TGCCAGAAAA GAAATTGGAT GATCTGGGTT TTGAGCCCTT GATGGAGCTC
CTCAAAATTA ATGCCATTGG GCCAGCTCTC ACGATTCGTT ATTTCTCCAA ACTATTAGAT
CCTCAACACA GCATTATGGT CACGCTATCC GCCAAGGTTG GCAGCATTGA AGACAATCGA
TTGGGTGGCT GGTATAGCTA CCGAACCTCT AAAGCCGCAC TCAATATGCT GATTAAAACC
GCTTCAATAG AGCTCGCTCG CACTAAGTCA AAGGTCGCCC TCATTGCCAT GCATCCAGGC
ACTGTCAATT CCAGGCTATC TAAACCATTT CGTGGAGAGC AGATTGGGCG ACCAGCGCAA
GATGCAGTAG CCGATATGTT TAACGTGATT GAAAATCTTC AACAGGGTGA TTCAGGAAGC
TTTCTTTCTT ATGCTGGTGA AAAATTACCC TGGTAA
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| Protein sequence | MKILPKPFRA LVIGSSGTIG LAFMELLKNN PSCSGVVGVH RHSEHPLDYQ NPESIKSCAE
ALASQGPFQL IINTIGVLHS GEWMPEKKLD DLGFEPLMEL LKINAIGPAL TIRYFSKLLD
PQHSIMVTLS AKVGSIEDNR LGGWYSYRTS KAALNMLIKT ASIELARTKS KVALIAMHPG
TVNSRLSKPF RGEQIGRPAQ DAVADMFNVI ENLQQGDSGS FLSYAGEKLP W
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