Gene Pnuc_1604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1604 
Symbol 
ID5052396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp1673588 
End bp1674142 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content46% 
IMG OID640471777 
Producthypothetical protein 
Protein accessionYP_001156382 
Protein GI145589785 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGCTC AATCCCTACT CATTCGCTTG TGCGTAATAG CTTGCTTGTT GTCAGGCTCA 
GCATCTGCGC GCGAGTTAAC TTATATAGAT GAAGCTCTGA ATCCGGCAAG GCTGCAAGGC 
AGTGGGAAAT TAACTTGGTG GGGCTTTCAT GTGTATGACG CCACTTTTTA TCGAGGCGCT 
AATTTGAATT CTCCCGAGTT TGCGCTCGAT TTGCGTTATC AAAGATCACT CAACGGCAAT 
GCAATTGCCA ATAGAACTAG TGACGAGATG AAGAAGCTTG GTGTGCCAGA GGCTCAAGCG 
CAGAATTGGG GAAAGCAGTT GGCAACCTTT TTGCCTAATG TCGAGCCTGG TCAGAACATC 
ACGGCCATCT ATACTCCGAA GCAGGGAACC ACGTTTTACT TTGAAGGCAA ACCACTTGCT 
CAAATCCCTG GATCAGATTT TTCTAAAGCA TTTTTCGGCA TCTGGTTAGA TCCTAAAACC 
AGCGCACCTA AATTACGCGA ACAATTATTG GGTCAAAATT GCCCACCACC CTTATTTCAA 
GAGGCTTGTA ATTAA
 
Protein sequence
MTAQSLLIRL CVIACLLSGS ASARELTYID EALNPARLQG SGKLTWWGFH VYDATFYRGA 
NLNSPEFALD LRYQRSLNGN AIANRTSDEM KKLGVPEAQA QNWGKQLATF LPNVEPGQNI 
TAIYTPKQGT TFYFEGKPLA QIPGSDFSKA FFGIWLDPKT SAPKLREQLL GQNCPPPLFQ 
EACN