Gene Pnuc_1603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1603 
Symbol 
ID5053691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp1673040 
End bp1673588 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content43% 
IMG OID640471776 
Productputative lipoprotein 
Protein accessionYP_001156381 
Protein GI145589784 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATA TCCTCAGTAG ATTTATCGCA GTATTATTCT GCGCAGGTTT TTTATTGGGT 
TGCTCTGGGC CTCAAGTTTC TCAATATGCC AATGAAAAAC CCACTTTAGA TCTCAGTGAG 
TATTTCTCGG GCACGATTGA TGCTTATGGA ATCTTTACTG ACCGCAGTGG AGCGGTAGTA 
AAACGCTTTA CCGTACTCAT TCAGGCGAAC TGGAAAGTAG TTGGTGGTAA AAAAGTGGGT 
ACCTTAGATG AAAGCTTTGA CTACTCTGAC GGAACAAAGC AAAAACGCAT CTGGACATTG 
ACAGAGACTG CCCCAGGAAA ATATATCGGC AAGGCAGATG ATGTGGTGGG AGAGGCTAAT 
GGATCCTCAG CAGGTAATGC GCTCAATTGG GCATATACCT TGGCTCTGCC AGTTGACGGA 
ACGGTTTACA ACGTGCAGTT TGATGACTGG ATGTATTTGG TCACACCTAA AGTCATGATT 
AATAAAGCCC AAATGAGTAA GTTTGGGATT AATTTGGGTG AAGTTACCCT GAGCTTCTAT 
AAGCGCTAG
 
Protein sequence
MKNILSRFIA VLFCAGFLLG CSGPQVSQYA NEKPTLDLSE YFSGTIDAYG IFTDRSGAVV 
KRFTVLIQAN WKVVGGKKVG TLDESFDYSD GTKQKRIWTL TETAPGKYIG KADDVVGEAN 
GSSAGNALNW AYTLALPVDG TVYNVQFDDW MYLVTPKVMI NKAQMSKFGI NLGEVTLSFY 
KR