Gene Pnuc_1602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1602 
Symbol 
ID5052290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp1671880 
End bp1672902 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content42% 
IMG OID640471775 
Productphosphate ABC transporter, periplasmic phosphate-binding protein 
Protein accessionYP_001156380 
Protein GI145589783 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0226] ABC-type phosphate transport system, periplasmic component 
TIGRFAM ID[TIGR00975] phosphate ABC transporter, phosphate-binding protein 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCTT TTTTGAAAAA AGCCCTGATT ATTGGCGCTA TTTCACTTGC TCCTACCGCA 
TTTGCTGTAG AAATGACTGG TGCTGGATCC TCTTTTATTT ATCCAGTATT AAGTAAGTGG 
GCTGAATCAT ATAAAGCTAA AAGCGGTGAC AGCCTGAATT ACCAGTCCAT AGGTTCTGGA 
GGCGGTATTA AACAGATTAA AGCTAAAACA GTTGATTTTG GTGCTACTGA TGCACCATTA 
AGTTTTGAAG ACTTACAAAG TAATGGCATG GTTCAGTTTC CAGCAATTAT TGGCGGCGTA 
GTTCCAGTTG TTAACATCGA AGGTATTGGC CCAAACCAGT TGAAGCTCTC TGGTGACCTT 
TTGTCAGATA TTTTCCAAGG TTCTGTAACA GACTGGAGCG ACAAACGCGT AGCTCTCCTA 
AATCCAGGCA TGAAGATCCC ATCTGGTCCG ATCACAGTTG TAACTCGTGC AGACGGATCT 
GGTACTACTG CAATTTTTAC TAGCTTCCTT TCTAAAGCAA GTAGCAACTT TAAAGATGCG 
GTTGGCTTTG GTGCGCAAGT TAAATGGCCT GCAGCTTCTA CTGTAAGTGG CAAAGGAAAC 
GAAGGCGTTG CGGCTAACGT TGCACGCATC AAGAACTCAA TTGGTTATGT TGAGTATGCT 
TATGCTAAAA AGAATAACCT GAGCTATACA CAGGTTCGCA ATGCTGATGG CGTAATAGTA 
TCTCCAACTG CAGAAGCTTT CGCTGCCGCC TCTGCCGGTA CAGACTGGTC TAAATTTCCT 
GGAATGAATA CTTTTATTAC ATATGCTAAA GGTGCTAAAG CATGGCCAAT TACAGGCGCA 
ACTTTCGTTG TAGTTTATAA AAAGCCAGAA AATAAATCTC AAGCTGCAGC AGTATTGAAA 
TTCTTTGATT ATTCATTCAA AGATGGTAAG AAAGCCGCCT CAGACTTAGA TTACGTCCCA 
ATGCCTGACG CAACCGTAGA TTACATTCGG AAGCAAGTTT GGTCACAAGT TGAGACTAAA 
TAA
 
Protein sequence
MKSFLKKALI IGAISLAPTA FAVEMTGAGS SFIYPVLSKW AESYKAKSGD SLNYQSIGSG 
GGIKQIKAKT VDFGATDAPL SFEDLQSNGM VQFPAIIGGV VPVVNIEGIG PNQLKLSGDL 
LSDIFQGSVT DWSDKRVALL NPGMKIPSGP ITVVTRADGS GTTAIFTSFL SKASSNFKDA 
VGFGAQVKWP AASTVSGKGN EGVAANVARI KNSIGYVEYA YAKKNNLSYT QVRNADGVIV 
SPTAEAFAAA SAGTDWSKFP GMNTFITYAK GAKAWPITGA TFVVVYKKPE NKSQAAAVLK 
FFDYSFKDGK KAASDLDYVP MPDATVDYIR KQVWSQVETK