Gene Pnuc_1595 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1595 
Symbol 
ID5053452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp1665543 
End bp1666019 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content51% 
IMG OID640471768 
ProductMgtC/SapB transporter 
Protein accessionYP_001156373 
Protein GI145589776 
COG category[S] Function unknown 
COG ID[COG1285] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCAGT GGGATCTATA CGGGACCATC GCACTCAGAC TCGGTTTAGC ATTACTGGTA 
GGAGCCATAT TAGGCTTAAA CCGTTGGCTC CACCATAAAT CCGCCGGTAT ACGAACCCAC 
TCCCTAGTAG CAATTGGATC AGCAACGGCC GTACTATTAA TTAGTGATTT CGTTCAGGAT 
GATGCCCAAT CCGTTAGCCG TGTTTTGCAA GGGTTAATTA CTGGTCTCGG ATTTTTGGGT 
GCCGGCGTCA TTATTCGCGA ACAACGCTCA CAAAAAATCT TTGGCCTCAC TACAGCAGCA 
AGTATTTGGT CTTGTGCCCT CATTGGCGCA GCCTTTGGGG CGGGACAATT TGCCTTGGGC 
GGACTTAGTC TTGGGGCCAT ATTGTTAACG CTAGTGATCG GGGGGCCGTT AGAGAGGCTT 
ATAGCAAGGG TCACTGGGGT TCGCCGAGCC TCCGAAGTAT CTAGCGATCC TGACTAA
 
Protein sequence
MAQWDLYGTI ALRLGLALLV GAILGLNRWL HHKSAGIRTH SLVAIGSATA VLLISDFVQD 
DAQSVSRVLQ GLITGLGFLG AGVIIREQRS QKIFGLTTAA SIWSCALIGA AFGAGQFALG 
GLSLGAILLT LVIGGPLERL IARVTGVRRA SEVSSDPD