Gene Pnuc_1591 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1591 
Symbol 
ID5053070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp1660548 
End bp1661264 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content44% 
IMG OID640471764 
ProductMgtC/SapB transporter 
Protein accessionYP_001156369 
Protein GI145589772 
COG category[S] Function unknown 
COG ID[COG1285] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTCG TAAATAACAT TAACTATGCC TCGCTGACTG ACACCACTAT CAGTCTTTGT 
GCCGCCTTTA TCTTGGGCGG ACTAATTGGC TTAGAGCGTC AATATCGTCA GCGAACTGCA 
GGTCTCAGAA CCAATATTCT AGTTGCCGTG GGCGCGGCCA TATTTGTGGA TGCTGGTAAT 
CGTTTAACCG GCCATGACGG TGCTGTTCAT ATCATGGCTT ATGTCGTCTC TGGTATTGGA 
TTTTTAGGTG CAGGCGTCAT CATGCGGGAA GAGGGCAACG TCAGAGGCAT TAATACGGCG 
GCTACTTTGT GGGCATCTGG TGCCGTTGGC GCATGTGCTG GTGCCGATTT ACTTCTCGAG 
GCTTCTCTCG CTACGATATT CATTCTTGCG GCAAATACTC TTCTTCGACC TGTAGTGAGT 
TTTATTAATA AGCAACCTCT AGATACCATT TCAGTAGAGG TTACGAACTC GGTTTATATC 
ATCACGCCAA AACACGCTCA AAAGATTGCT TTAAAGCAAT TCATTAAAAC ATTGGAAGAA 
GCGGGCTATC AAACGCAAGA TGTTGAAGTG CATCAATTTG GAACTGATGA TGTGGAGATA 
CAGGCTGTAT TAACTGCATC AGCTGTAAAT GGAGATGATA TGGATCGGTT AATTGCAAAA 
ATTGCCGATC AAGATTTCGT GTCTCAGGCA TTCTGGAGTC CTAGTACAAC AGATTAA
 
Protein sequence
MEFVNNINYA SLTDTTISLC AAFILGGLIG LERQYRQRTA GLRTNILVAV GAAIFVDAGN 
RLTGHDGAVH IMAYVVSGIG FLGAGVIMRE EGNVRGINTA ATLWASGAVG ACAGADLLLE 
ASLATIFILA ANTLLRPVVS FINKQPLDTI SVEVTNSVYI ITPKHAQKIA LKQFIKTLEE 
AGYQTQDVEV HQFGTDDVEI QAVLTASAVN GDDMDRLIAK IADQDFVSQA FWSPSTTD