Gene Pnuc_1582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1582 
Symbol 
ID5052886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp1652729 
End bp1653502 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content43% 
IMG OID640471755 
Producthypothetical protein 
Protein accessionYP_001156360 
Protein GI145589763 
COG category[S] Function unknown 
COG ID[COG2326] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGAAAA AAGATCTCGT AAAGCTGGAA TCCTCTAGCT ATGACTCACA GCTCCGCTTA 
TTACAAATAG AGCTAGTAAA ACTTCAAAAT AGCCTCATTA GTAAGGGTGA TCAGATACTG 
GTCATCCTCG AGGGTCGTGA TACTGCCGGT AAAGATGGCA CCATTAAGAC CATTACTGAG 
CATTTGAGCC CACGAGAAAC TCGGGTAGTT GCCCTAGGCA AGCCATCAGA TGTCGAGTCT 
GCAGAATGGT ACTTTCAGCG CTATGTCGCT GAATTGCCTA AGAAAGGAGA GTTTGTTCTC 
TTCAATCGCA GCTGGTACAA CCGAGCTGGC GTTGAGAAAG TAATGGGCTT TTGCACCAAA 
CCTCAATACA CAAACTTTAT GGATACGGTT AATCCCTTTG AATCCATCCT AGTGAGCTCT 
GGTATCACCC TTCTGAAATA CTATTTAGAT ATTTCTAAAA AAGAGCAGGC TGTTCGTCTT 
AAAGCTAGAG AAGATGACCC TCTGAAGCAA TGGAAGATTA GCCCTATTGA TCAACAGGCG 
CAGAAAAAAT GGGATGCTTA TAGCAAGTGT CGAAATGACA TGCTACAAAA TACCAGCCCA 
AAAGATGCGC CTTGGATAAT CGTTAGAGCA AACGATAAAA AGCTGGCCCA CCTCAATATG 
ATCAGAGATC TTCTCTCTAG GGTTGACTAC CCCGGTAAAG ACAAAAGTCT ACTTAAAGTT 
GATCAAGAGA TCACCTTTAA GTGGGACGGG AAAATTTCAA GTCTAGAAAA ATAA
 
Protein sequence
MGKKDLVKLE SSSYDSQLRL LQIELVKLQN SLISKGDQIL VILEGRDTAG KDGTIKTITE 
HLSPRETRVV ALGKPSDVES AEWYFQRYVA ELPKKGEFVL FNRSWYNRAG VEKVMGFCTK 
PQYTNFMDTV NPFESILVSS GITLLKYYLD ISKKEQAVRL KAREDDPLKQ WKISPIDQQA 
QKKWDAYSKC RNDMLQNTSP KDAPWIIVRA NDKKLAHLNM IRDLLSRVDY PGKDKSLLKV 
DQEITFKWDG KISSLEK