| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1561 |
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| Symbol | |
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| ID | 5053012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1633260 |
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| End bp | 1634930 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640471734 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001156339 |
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| Protein GI | 145589742 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.86082 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTACAG CGCATAAAGC TACTCCGATG ACTGCCGAAG AGCGCAAAGT TATTTTTGCT
TCCTCATTGG GTACGGTCTT CGAGTGGTAC GATTTTTTCC TCTACGGTTC ACTTGCGGCA
ATTATTGCTA AGCAATTCTT CTCAGGGCTA GATTCTGGTT CTGCGTTCAT TTTCGCTTTG
CTTGCGTTTG CCGCTGGTTT CATCGTGCGT CCATTTGGCG CATTGGTGTT TGGTCGCTTA
GGTGATTTGA TTGGTCGTAA ATACACCTTC TTGGTCACGA TTTTGATTAT GGGCGGCGCT
ACGTTTGTTG TTGGTTGCTT ACCAAACTAC GCCACTATTG GCGTTACTGC CCCTGTAATT
TTGATTTCCT TGCGTATGCT TCAAGGTTTG GCTTTGGGTG GTGAGTACGG TGGTGCCGCT
ACTTATGTTG CAGAACATTC CCCCGCTGGC AAACGCGGTG CTTACACCTC ATGGATTCAA
ATGACGGCCA CTATTGGTCT GTTCTTATCT TTACTCGTGA TTTTGTTTAC CCGTGAATTC
ACTGGCCCAG ACTTTGACGT GTGGGGCTGG CGTGTTCCAT TCCTAGTATC AATTGCCTTA
TTGGCTGTTT CTGTATGGAT TCGTTTGTCC ATGAATGAGT CACCAGCCTT TAAGAAGATG
AAAGAAGAGG GTAAGTTATC TAAAGCACCT TTGACAGAAT CTTTTGGTCA ATGGAAAAAC
TTAAAAGTCG TGCTTTTGGC GTTATTTGGC TTAGTAGCTG GTCAAGCAGT GGTTTGGTAT
ACCGGTCAGT TCTATGCACT GTTCTACCTT ACTCAAGTAT TGAAGGTAGA TCCTAAGACG
GCTAACTTAT TAATGACAGC TGCTTTAGTT ATTGGCACAC CATTCTTCGT AGTGTTTGGT
AGCTTGTCTG ACAAGATTGG CCGTAAAGTG GTGATTATGA GTGGCTTGTT ATTGGCAATT
ATTTTATACA TCCCCAATAC ACCGGTGTCC ATCTTTAACG GCATTACTCA CTTCGCTAAC
CCAGCGTTAG AAAAAGCAAT GGCAACAGCG CCAGCAACCA TTACTGCTGA TGTCAACGAG
TGCTCCTTCC AGTTCAATCC TACAGGTACC TCTAAATTCA CTAGCTCATG CGATATTGCC
AAACAAGTGA TGGCCTCTAA CTCTGCTAGT TACACTACTA TTCCAGCTCC AGCGGGCAGC
GTTGCTGTGG TCAAGATTGG TGATGTAGAG ATTCCTGGCT ACTCAGCTAA GGGACTGGAT
CCTGCTGAAG CAAAAGCGAA AGATGCTGAG TTTAAGAAGG CAATTCGTGA TGCTTTAACT
AAAGAAGGTT ACCCAGTTAA AGCAGATCCA GCACAAATGA ATTATGTGAT GTTGGTTATT
TTGCTTAGCA TTTTGGTAAT TTTGGCAACT ATGAGTTATG GACCCATCGC TGCAATGTTG
GTTGAGATGT TCCCAACTCG TATTCGTTAC ACCTCTATGT CCTTGCCATA CCATATTGGT
AACGGTTGGT TCGGCGGCCT CTTGCCAACG ATCTCCTTTG CCTTGGTTGC GCAAAACGGT
AACATTTACT ACGGTCTCTG GTACCCAATC ATCATCGCTG CAATGACATT GGTAATCGGT
GTTCTGTTTG TACGTGAAAC TAAAGATGTA GATATTCTCA ACATGGATTA A
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| Protein sequence | MSTAHKATPM TAEERKVIFA SSLGTVFEWY DFFLYGSLAA IIAKQFFSGL DSGSAFIFAL
LAFAAGFIVR PFGALVFGRL GDLIGRKYTF LVTILIMGGA TFVVGCLPNY ATIGVTAPVI
LISLRMLQGL ALGGEYGGAA TYVAEHSPAG KRGAYTSWIQ MTATIGLFLS LLVILFTREF
TGPDFDVWGW RVPFLVSIAL LAVSVWIRLS MNESPAFKKM KEEGKLSKAP LTESFGQWKN
LKVVLLALFG LVAGQAVVWY TGQFYALFYL TQVLKVDPKT ANLLMTAALV IGTPFFVVFG
SLSDKIGRKV VIMSGLLLAI ILYIPNTPVS IFNGITHFAN PALEKAMATA PATITADVNE
CSFQFNPTGT SKFTSSCDIA KQVMASNSAS YTTIPAPAGS VAVVKIGDVE IPGYSAKGLD
PAEAKAKDAE FKKAIRDALT KEGYPVKADP AQMNYVMLVI LLSILVILAT MSYGPIAAML
VEMFPTRIRY TSMSLPYHIG NGWFGGLLPT ISFALVAQNG NIYYGLWYPI IIAAMTLVIG
VLFVRETKDV DILNMD
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