| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1560 |
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| Symbol | |
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| ID | 5052327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 1632314 |
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| End bp | 1633189 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640471733 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001156338 |
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| Protein GI | 145589741 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTCAA TGAATTGGGA TCATTTGCAG TATTTCTTGG CGCTTGCAAA AGATGGGCGA
TTAATTGTGG CGGCCCGTTC TTTAGGGGTA AACCACACCA CTGTTTCTAG ACGCATTCAG
GCTCTGGAAC GGGAAATGGG TGTGCAATTA TTTAGCCGCA ACAACCTTGG TTTTGAGCTC
ACTGAAGCAG GAATGCAATT ACAAAACATT GCTCATAAGG TGGAGCAGCA AATTAATGGC
ATTAGCAAAA ACATTGGCTC TGAAAACACC GAAATAAGCG GAACGGTTCG AGTGGGTGCC
ACTGAAGGAT TTGGTACTTT TATTGTTGGC CCTATTTTGT ACGAGTTAAG TAAAAAATTT
CCTCGTCTAT CAATCGACCT CTTATCCCTT CCGCGTATCG TTAACTTATC ACGCAGAGAA
GCTGACATCG CCATTACGCT ACAAAGACCA ACTCGTGGTC CCTATCTCGT TACCAAACTA
AGAGACTATG AACTTAAGCT CTACGCATCC AACGAATATC TGGCGTCTAA TCCAGCCATA
CTCTCGCGTG GTGATTTAGA TAAGCAAACC TTTATTAGCT ATGTCGATGA TTTGCTATTT
AGCAAAGAGC TCAGCTATTT AGATGAAATT TGCAAACCAA AACAAATTTC TTTTCGGAGT
ACGAGTATCC AATCTCAGCT CCAGGCAGCC CGCGTTGGGC TTGGTGTAGC GGTACTTCCT
AGCTTTATGG TGCAAGCCCA GGATGGTCTG CAAGAAATTC TTCCAAAAGA TATTCGTATT
ATTCGCAGCT TTTGGATGAT GATGCCCAAT GAGTACAAGA AAGTGGATCG GATGAATTTG
GTATGGGATT GCCTTAAAAA AGAGGCTTCA GGGTAA
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| Protein sequence | MNSMNWDHLQ YFLALAKDGR LIVAARSLGV NHTTVSRRIQ ALEREMGVQL FSRNNLGFEL
TEAGMQLQNI AHKVEQQING ISKNIGSENT EISGTVRVGA TEGFGTFIVG PILYELSKKF
PRLSIDLLSL PRIVNLSRRE ADIAITLQRP TRGPYLVTKL RDYELKLYAS NEYLASNPAI
LSRGDLDKQT FISYVDDLLF SKELSYLDEI CKPKQISFRS TSIQSQLQAA RVGLGVAVLP
SFMVQAQDGL QEILPKDIRI IRSFWMMMPN EYKKVDRMNL VWDCLKKEAS G
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