| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1557 |
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| Symbol | |
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| ID | 5052319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1628970 |
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| End bp | 1629866 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640471730 |
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| Product | 3-hydroxyisobutyrate dehydrogenase |
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| Protein accession | YP_001156335 |
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| Protein GI | 145589738 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
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| TIGRFAM ID | [TIGR01692] 3-hydroxyisobutyrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.734948 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATTG GATTTATTGG TCTAGGTAAT ATGGGTGCCC CAATGGCACG CAATCTTTTA
AAAGCAGGTC ATGAGTTAAC CGTCTTTGAC GTGGTGCAAT CAAATGTGGA TGCATTGGTT
GCTCACGGTG CTGGCAAAGC AAAAGCGGCA ACTACACCGG CTGCAATCTT AAAAGAGGGT
GTTGAAGTCA TTGTTACGAT GTTGCCTGCT GCGCAGCACG TGAAATCTGT TTATCTGGGT
AATGATGGCA TTCTGTCTGG AAATGTAGAT GGCGTAATTC TGATTGATTC CTCAACCATT
GATCCAATGT CTGCTCGCGA AGTGGCTAAA GCGGCTGCCG CTAAAAAAGC GCTGATGTTA
GATGCTCCAG TATCTGGCGG TACTGGTGGT GCTGAAGCAG GAACCCTGAC TTTCATGGTG
GGTGGAGAAG AAGGCTTGTA TGCCCAGATG CAGTCTTTGC TGCAGGCAAT GGGAAAAAAC
ATTGTGTATT GCGGGGCAGC TGGTAATGGT CAGGTCGCTA AAGTAGCTAA CAATATGTTG
TTGGGTATTT CCATGATTGG CACTGCCGAA GCAATGGCTT TAGGTGTGTC ATTGGGAATG
GATGCCAAAG TGTTGGCTGG CATCATCAAT ACCTCTAGCG GACGTTGCTG GAGTTCTGAT
ACTTACAATC CCTATCCAGG TGTTTTAGAA AATGTACCTG CATCACGTGG GTATACCGGT
GGATTTGGTT CAGATTTGAT GTTGAAAGAT TTAGGTTTGG CTACGGAAGC GGCTAAATTA
GCAAAACAGC CAGTACCGCT TGGTAGCTTA GCTCAACAGG TATATCAAAC CTTTAGCTTG
CAAGGCAATG GTGGTCTGGA TTTTTCTGCA ATTATTAAAC TCTTTACTAA GAAATAA
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| Protein sequence | MKIGFIGLGN MGAPMARNLL KAGHELTVFD VVQSNVDALV AHGAGKAKAA TTPAAILKEG
VEVIVTMLPA AQHVKSVYLG NDGILSGNVD GVILIDSSTI DPMSAREVAK AAAAKKALML
DAPVSGGTGG AEAGTLTFMV GGEEGLYAQM QSLLQAMGKN IVYCGAAGNG QVAKVANNML
LGISMIGTAE AMALGVSLGM DAKVLAGIIN TSSGRCWSSD TYNPYPGVLE NVPASRGYTG
GFGSDLMLKD LGLATEAAKL AKQPVPLGSL AQQVYQTFSL QGNGGLDFSA IIKLFTKK
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