Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_1552 |
Symbol | |
ID | 5052572 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | - |
Start bp | 1623838 |
End bp | 1625256 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640471725 |
Product | dehydrogenase catalytic domain-containing protein |
Protein accession | YP_001156330 |
Protein GI | 145589733 |
COG category | [C] Energy production and conversion |
COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
TIGRFAM ID | [TIGR01348] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00384703 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTATAA AAGCGTTTTA TAGCCAATAT TTAGCATCCT ATTTGGCAAA AAATACTCCA AAATTAGCCT CATATTTATT ACTATTAGGC ATTGGAGCGG CTTTGGCGAT TGAGATTCTT GTTCCCGATA TAGGGGACTA TCAAAACATC CCTGTGATTG AGGTATTGGT ACAAGTGGGT GATCAGATTG AGAAAGAGCA ATCTATTTTG ACCTTGGAGT CCGATAAGGC AACTATGGAT GTGCCGTCTT CTCATTCGGG AATCGTGAAA GAAATTAAGG TCAAGATTGG CGATCTACTT TCTCAAGGGA AGTCAGTCAT CGTCCTGGAG GATGGCCTAC CATCTGATGC TACAAGCAAT GAATCTGAGC ATATCTCGCA AAGCACTATT GAAGTCATCA ATAAAGCAAA GACCAATGAA CTCTTGACTA TCGATGGGTC TCGAGCAGAG TCCTCTAAAG AAATCATTTC AAGTTTGGTC AGCAATGACC CTAATGATGA AAGTCGAGAA GCATGGGCAA GTCCTTCCGC GAGAAAGTTC GCCCGTGAAT TTGGTGTGGA TCTACAAAAA GTAAAAGGCA GTGGAATAAA AGGCCGGGTG ACGAAAGAAG ATATTCAGCT ATTGATTAAA AGTACGATGT CCACTATTGG GGCCAATACT GAAAGGGCTT CCGCGGGAAT TTCAGGAATG GATATCTTGC CTTGGCCAAA GGTGGACTTC AGCAAATTTG GCTCCATAGA GAGGGTCGCA CGCTCGCGGA TTCAGAAAGT ATCGGCAGCC AATCTTGCTC GCAATTGGCT CATGATTCCA GCGGTAACTT ATCACGATGA TGCGGATATT ACTGATCTGG AGAAATTCCG CAGCGACCTC AATAAAGAGG GTAAAAAAGA TGCGGTGAAG ATTACCCTGC TGGCTTTCCT AATTAAGGCA GCTGTAGCTG CCTTAAAGAA ATACCCTACT TTCAATGCTT CACTTGATGG TGAGGAATTG ATCCTTAAAA AATATTGCCA TATTGGCTTT GCAGTCGATA CCAATATTGG ATTGGTGGTA CCGGTGATTC GCAATGCGGA TCAAAAAGGG ATTTTAGAGA TTGCTAAAGA AACCGCAGAA CTTGCCCAAT TAGCGCGTGA CGGAAAGCTT AAGCCAGAGC AAATGCAGGG AGCTAGTTTT ACGATCTCTT CCTTAGGGGG TATAGGGGGA ACTTACTGTG CTCCCATCAT TAACGCCCCA GAAGTGGCGA TATTAGCCGT CAATAAGTCC GCCATAAAGC CCGTCTGGGA TGGTGCCGAG TTTATTCCTC GCTTGATCTG TCCGTTATCC ATGACTGCTG ATCATCGTGT AATTGATGGC GCTTTAGCTA CCCACTTCAC TACTTATTTA GCTCAGCTTT TAGCTGATTT TCGCAAAGTG CTCTTGTGA
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Protein sequence | MLIKAFYSQY LASYLAKNTP KLASYLLLLG IGAALAIEIL VPDIGDYQNI PVIEVLVQVG DQIEKEQSIL TLESDKATMD VPSSHSGIVK EIKVKIGDLL SQGKSVIVLE DGLPSDATSN ESEHISQSTI EVINKAKTNE LLTIDGSRAE SSKEIISSLV SNDPNDESRE AWASPSARKF AREFGVDLQK VKGSGIKGRV TKEDIQLLIK STMSTIGANT ERASAGISGM DILPWPKVDF SKFGSIERVA RSRIQKVSAA NLARNWLMIP AVTYHDDADI TDLEKFRSDL NKEGKKDAVK ITLLAFLIKA AVAALKKYPT FNASLDGEEL ILKKYCHIGF AVDTNIGLVV PVIRNADQKG ILEIAKETAE LAQLARDGKL KPEQMQGASF TISSLGGIGG TYCAPIINAP EVAILAVNKS AIKPVWDGAE FIPRLICPLS MTADHRVIDG ALATHFTTYL AQLLADFRKV LL
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