| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1550 |
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| Symbol | |
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| ID | 5052508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1619764 |
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| End bp | 1621104 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640471723 |
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| Product | SAF domain-containing protein |
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| Protein accession | YP_001156328 |
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| Protein GI | 145589731 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4091] Predicted homoserine dehydrogenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000710074 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCCTTA TTCAGAAGTT GAAGGCGCGT GCTGCCAATA ACAATCCTGT GCGTGTAGGT
GTGATTGGAG CAGGCAAGTT TGGTTCGATG TATCTTTCCC AGGCACCTCG TACTCCCGGC
ATACATTTAG TAGCCGTTGC CGACTTATCT CCAGCGCGTG CAAAAGAATC ATTGGCTCGT
GTAGGTTGGG ATACACCTCG TTATAGCGCT ACATCAATGC AAGATGCTGC TAAATCAGGC
GCTACTTTTG TGACTGATGA TGCAGAAAAG ATGATTGCTA GTGAGTACAT CGACATCGTG
ATTGATGCTA CCGGGAGTCC AGCTGCTGGT ATTCGTCATG CATTGCTTTG TTTTGATCAT
CGCAAACATA TCATTATGGT CAACGTAGAG GCTGACGTGT TGGCTGGCCC ATTGTTAGCG
CGTAAGGCAG CAGAGGCTGG GGTCATTTAC TCCATGGCTT CTGGTGATCA ACCAGCTCTC
ATTGCTGAAC TAGTTGATTG GGCTAGAACG ATTGGCCTTG AAGTAGTGTG CGCTGGTAAG
GGCACTAAGT ATTTGCCTAT CTATCACCAG TCCACTCCAG ATACTGTCTG GGGGCACTAC
GGATTTTCTG AAGAGCAGGT GGCTGGTGGC GACTTTAATG CACAAATGTT CAACTCATTC
TTGGATGGCA CTAAATCAGC GTTAGAAATG GCGGCAGTAT CGAATGGTTG CGATTTAACG
CCTCCAAGCA ATGGCTTGGA ATTTCCACCT TGCGGGGTTG ATGATTTACC GCACATCTTT
CGCCCCATAT CTGAGGGTGG AATTCTGAAG CAAAAAGGAA CTGTAGAGGT AGTCTCTTCA
GTTGAAAGAG ACGGTCGCCC AGTATTTAGA GATTTACGTT GGGGTGTATT TGCAGTGTTT
GAGGCACCGA GCCAATATGT TATTGATTGC TTCTCGCAAT ATGGCTTAAA GACCGATAGC
ACTGGTAAAT ATGCAGCAAT GTATAAGCCT TATCACCTTA TAGGCTTAGA ACTTGGTATC
TCAGTTGCGA GTATTGCCGT ACGTGGCGAA GCTACAGGCG CTACAGGTGA TTGGAGGGGT
GATGTGGTTG CCACCACTAA GCGTGCACTG AAAGCGGGCG AAAAATTAGA TGGAGAGGGC
GGTTTTACCG TTTACGGCAA ACTCATGACA GCTGCTGATT CCTTAAAACT CGGCGCTCTA
CCAATTGGTC TGGCACACAA CATGGCTCTG AAAAGAGATA TTCCTGCGGG AAAACCAGTT
TGCTGGAGTG ATGTTGACTA CGATGCCACT AAGCAAGCAA TAGCGTTCCG TAGGGAAATG
GAAACAGTAT TTGGTAAATA G
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| Protein sequence | MSLIQKLKAR AANNNPVRVG VIGAGKFGSM YLSQAPRTPG IHLVAVADLS PARAKESLAR
VGWDTPRYSA TSMQDAAKSG ATFVTDDAEK MIASEYIDIV IDATGSPAAG IRHALLCFDH
RKHIIMVNVE ADVLAGPLLA RKAAEAGVIY SMASGDQPAL IAELVDWART IGLEVVCAGK
GTKYLPIYHQ STPDTVWGHY GFSEEQVAGG DFNAQMFNSF LDGTKSALEM AAVSNGCDLT
PPSNGLEFPP CGVDDLPHIF RPISEGGILK QKGTVEVVSS VERDGRPVFR DLRWGVFAVF
EAPSQYVIDC FSQYGLKTDS TGKYAAMYKP YHLIGLELGI SVASIAVRGE ATGATGDWRG
DVVATTKRAL KAGEKLDGEG GFTVYGKLMT AADSLKLGAL PIGLAHNMAL KRDIPAGKPV
CWSDVDYDAT KQAIAFRREM ETVFGK
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