Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_1548 |
Symbol | |
ID | 5052844 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | - |
Start bp | 1617501 |
End bp | 1618364 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640471721 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_001156326 |
Protein GI | 145589729 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.133161 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTATTC AATATATTCA AGCCAACAAA CTCCAATTTG CCTATCAGGA ATACGGAGAT GGTCCGTTAG TTATTTTGCT GCATGGTTTT CCAGATATCG CCACCACTTG GAGTCATCAG GTGCCTGCGC TTGTTGCTCA GGGATATCGA GTGGTAACAC CTTATTTGCG TGGTTATACC CCCACTGAAA TTCCTGAAGG TGGGTTTTAT GACAAAGCTA CTTTGGTGGA AGATATTGCG GGTCTGATCA AAGGGCTTTC TGGCGGTAAG CCAGTTCATC TCGTTGGGCA AGACTGGGGT GCAATCATTG CTTACGCGGT ATTGGCCGCA TATCCTGAAT TAATTTCTCG AGCAGTTGTC ATGGCAGTGC CGCATCCAGG CCAGGTGACC GAAAGCCTGG TGAATCCAAA GCATATTCAT CGATCATTTC ATTGGTGGTT CTTTCAGCTA CCAGATTTGC CAGAGAAGGC CATCTTAGCG AATGATCAAG CATTCATTGA TTACCTATGG GCGTATTGGA CAATTCCAAG TCATCGTGAT GAGGAGCATA TTGTTGCAGT GAAGGAAACA TTAGAAAAAC CTAGGGTACT GTCAGCAACT TTGGCTTATT ACCGTGCAAT GTTTGATGTC TCTAAAGCAG ATCCTGCTTT GACGGCTGTA AGAGAAAAAA TGACTCGTCT AATTCAGGTA CCAACATTGG CACTTTGCGG TCGTGAGGAT CTGCGAGCAG AACTCATGCT CGAGCAGTCA CAGTATTTCA CTAATGAATA TGAATTCAAG CTCGTAGACA ATGCAGGACA TTTTTTGCAT CGCGAACAAC CCGAGGCAGT AACTCGGCTG ATTATTGACT GGCTTAAGAG GTAA
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Protein sequence | MTIQYIQANK LQFAYQEYGD GPLVILLHGF PDIATTWSHQ VPALVAQGYR VVTPYLRGYT PTEIPEGGFY DKATLVEDIA GLIKGLSGGK PVHLVGQDWG AIIAYAVLAA YPELISRAVV MAVPHPGQVT ESLVNPKHIH RSFHWWFFQL PDLPEKAILA NDQAFIDYLW AYWTIPSHRD EEHIVAVKET LEKPRVLSAT LAYYRAMFDV SKADPALTAV REKMTRLIQV PTLALCGRED LRAELMLEQS QYFTNEYEFK LVDNAGHFLH REQPEAVTRL IIDWLKR
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