Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_1544 |
Symbol | |
ID | 5053412 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 1614035 |
End bp | 1614700 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640471717 |
Product | GntR family transcriptional regulator |
Protein accession | YP_001156322 |
Protein GI | 145589725 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.403257 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTTCTC AACTAAACAA ACTTCCCGCT AGAACAGACT ATGTCGAGGC GGTGTACAAG GCCTTACTTG ACGCGATTAG TGACGGCTCA CTACCGCCAG GGACTCGCAT TACTCAGGAA GAAATTGCTG AGCAAATGAA TGTCTCGCGC TTGCCCGTTC TGCAAGCACT CAGAATGCTA AAAAATGATG GTTTTGTGGA AGATGCTCCC GGAAGGGGCT TGCAAGTTAC AGCATTAAAT ATTGAATGGA TTGATAAGTT ATATGAAATA CGTGGCGCAC TCGATTCTCT AGCTGCAAAA CTAGCAGCCC AAAAGAAATG CATTATTGAC CCTGCCCTAA TTAAGAACGG GCGCGCCATT TCAGAGAAAG GCAATGTTAA GGCCTTAATT GATGCTGACA TGGCCTTTCA TAGCGCTATT TATGAAGCTT CTGAAAATCC ACTAATTGCA AAAAGCGCGC ACTTACACTG GGTTCATCTA CGCAGAGTCA TGGGGGCTGT ATTGCAATCA TCACAACGAT CAGCTATTTG GGATGAACAC CAAGCAATTG CTGATGCCAT TAAAAATGGG GATGAAAAAA AAGCTGCAGA ACTTTCAGAA TTGCATGCAA TGCGAGCTAG AAAAAATCTG ATTCATCAAC TGAGCGAAGT TCTAACGAAC CATTAA
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Protein sequence | MLSQLNKLPA RTDYVEAVYK ALLDAISDGS LPPGTRITQE EIAEQMNVSR LPVLQALRML KNDGFVEDAP GRGLQVTALN IEWIDKLYEI RGALDSLAAK LAAQKKCIID PALIKNGRAI SEKGNVKALI DADMAFHSAI YEASENPLIA KSAHLHWVHL RRVMGAVLQS SQRSAIWDEH QAIADAIKNG DEKKAAELSE LHAMRARKNL IHQLSEVLTN H
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