| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1543 |
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| Symbol | |
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| ID | 5053404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1612350 |
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| End bp | 1613909 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640471716 |
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| Product | Rieske (2Fe-2S) domain-containing protein |
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| Protein accession | YP_001156321 |
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| Protein GI | 145589724 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.453445 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGATTA AGCAAGAGCA AGCGGAAAAG AAGGTTGGTG CAACAGCTGG AACAACAGCA
AGCCCCAAGA AATTAGTGCC ATTTGGTGGT TACTACACCA ACAAAGTTCC TGGCCATGAT
CCAGAATTGA CTGAAGTTGG CCCCGGTACT CCAATGGGTG AGTACATGCG TGGTTTCTGG
CATCCCGTTT GCATGTCAAT TGAGCTTACT GATACACCAA GGTTTTTGAC GATCTTAGGC
GAAGAGTTAG TAGCATTTCG CGATGGCAGC GGTAGCGTTG GTGTATTGCA TGCACATTGT
GTACATCGCG GTGCTTCACT TGAGTATGGT TTGATTCAAG AGCACGGAAT TAAGTGTTGC
TACCACGGCA TGGTGTTTGA CGTTGATGGT ACTTGCCTTA ATGCGCCCTT CCCAAAAGGT
GAAGAAGCTG AGGCTGAAAA ATACGCTTGC TCAATTCAGC AGGGTGCATA TAAAGCTTTT
GAAAAAAATG GTTTGGTCTT TGCTTACATG GGTGCTCCAG ATAAAGAGCC GCCATTCCCG
GAGTGGGAGT CAGACTTTAC TGTTGCAGAA GGTGACGAGT TAGTTCCTTA TAGCAATTTC
CAACACTGCA ATTGGTTGCA AGTGCAAGAT AATGCAGCAG ATAATTTCCA CACAGCTGAA
TTGCATGCCG CCAAAAACGT GGTGGGTGGA CACTATCAGG GCACTACGTT TGATGAAGTG
GGCGCCCCAA CAATGGAGGT GCACCCTGAT ATGCAATTCG TGCCGATCCA CGGCGGTCGT
GGCCTTGCTT GCTCAGGTGC GCGCCGTGTA AACAACGAAA AATTATTTAT TCGTGTTCAG
CATCAAGTGC TACCAAACTT AAGTTTGCAT GCATATACGT CTGAAGATGG TTCAAACAAA
AAATTATTCA GTCGCTTCCA TATTATTCGT TGGACTGTTC CAGTCGATGA CTTTAATAGC
AAGATGATTG GTTGGCGTGT CATGGGTCCT GGTATTGATA CTCGTGGTAT TGGTCAAAAA
GAGCTAGTAG GCTATGAGTC CATTGACTTT TTAGATGGTC AGGTTGCATT ACGAAGGGCT
GAGCGCTTTG GCAATCACAC GATTAACGAT ATCGTGGAGA TTCCTGCTGA TCACAGATCA
AGGCCTAATT ACAAGATGGC CCAATATGCG CCTGGTGACT ATGAGGCAAT TATTAGTCAA
CGGCCCATTG CTGTTCATGC GTTAGAGAAC CCTACTAAAT TTGATGCGGG CCCATACCTC
TTTAGAAAAA TGTTGCGTGA TGCCGTGCGT GGATCTAATC CAGCAGCTAG TGCAGAGGCA
TTTTCTGAGT GGCTAAAAGA TTTCGGTGGA GCGCCAAATA GCTACTGTTC TGGAAATGTA
TTTGAATTAC CTATTGCCGC AACAACTGAA GAAGAAATTG CGCAAAGACG CTTTGTTGCT
AAAGGAGTGA TTGCTATCCT CACGGAGAGT GAGCAGTACA AAGGCAAAGA GCGCATTGAG
TTTGTTAAGA GCAAGATGGA AGAGCTTGAG CAGACTGCAA AAGCACAATT TAAGCATTAA
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| Protein sequence | MTIKQEQAEK KVGATAGTTA SPKKLVPFGG YYTNKVPGHD PELTEVGPGT PMGEYMRGFW
HPVCMSIELT DTPRFLTILG EELVAFRDGS GSVGVLHAHC VHRGASLEYG LIQEHGIKCC
YHGMVFDVDG TCLNAPFPKG EEAEAEKYAC SIQQGAYKAF EKNGLVFAYM GAPDKEPPFP
EWESDFTVAE GDELVPYSNF QHCNWLQVQD NAADNFHTAE LHAAKNVVGG HYQGTTFDEV
GAPTMEVHPD MQFVPIHGGR GLACSGARRV NNEKLFIRVQ HQVLPNLSLH AYTSEDGSNK
KLFSRFHIIR WTVPVDDFNS KMIGWRVMGP GIDTRGIGQK ELVGYESIDF LDGQVALRRA
ERFGNHTIND IVEIPADHRS RPNYKMAQYA PGDYEAIISQ RPIAVHALEN PTKFDAGPYL
FRKMLRDAVR GSNPAASAEA FSEWLKDFGG APNSYCSGNV FELPIAATTE EEIAQRRFVA
KGVIAILTES EQYKGKERIE FVKSKMEELE QTAKAQFKH
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