Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_1541 |
Symbol | |
ID | 5052802 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | - |
Start bp | 1610347 |
End bp | 1611282 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640471714 |
Product | 2-dehydropantoate 2-reductase |
Protein accession | YP_001156319 |
Protein GI | 145589722 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1893] Ketopantoate reductase |
TIGRFAM ID | [TIGR00745] 2-dehydropantoate 2-reductase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGTCAAAAT ATCAAAAGAT CTATGTATTA GGTGCAGGCG CAGTGGGTTG CTTTTTTGGA GGCATGCTCG CTCGTGCAAA GCATGATGTC ACTCTGATTG CTAGAGTTGA TCGCGCAGAG GCGATCAATG AATTGGGTTT GGAAATGGAC TGCAAGTCAT TTCAAGAAGT CATCAAAGTG AAGGCAAGTA GCGATCTTTC TCTACTAAGA GATGCCGATC TCGTCCTGTT GAGTGTGAAA TCTCCGGATA CAGAAAAAAC AATTCAAGAT ATTGCTTCTG TATTACCAAG TCATGCAGTT ATATTGAGTT TGCAAAATGG AGTGGCTAAT ACTCAGATTG CATCCGGTCT CATTTCCAAT CCAATATATC CAGCAGTGGT CTATGTAGCA GCGGGGATGA ATGGTCATAG AACCATGAAA CATCATGGGC GTGGAGAGCT TTTGGTGGGC AGTCTTCAGG AGATAACACC GCCCGACCAA GAAAAGCTCG CTGGTATTTG CGCATTATTC GAGAGCTCAG GGATACCTTG TGCGATTACC GCTCAAATTA AAAGGGATAT GTGGCTCAAG TTTTTGGTGA ATTGCAGCTA CAACGGAATT TCTGGAATTG GACAAATTAC CTATGGTGAG ATGGTGCGGG TACCGGAGAT TATTCAACAG ATTGATGGTA TTACCCATGA ATTTATCAAG ATTGCTGCTT TAGAGGGGGT TCTGATTTCA GAAGCTGAGG GCAGAGAAGC AAATGAATTG ATCGCATCGA CCATGGTAAC GCAGCGCTCT TCGACTGCTC AAGATCTTGC CAGGGGCAAA AAAACAGAGA TTGATTTTCT CAATGGCTAT ATTGTGCAGC TCGCTAAAAA ATATGGTGTT GAAGTGCCGT ATAACCAATC AGTCTATGCT TTGATAAAGA TGCTAGAACG AGCTCAACAT AACTAA
|
Protein sequence | MSKYQKIYVL GAGAVGCFFG GMLARAKHDV TLIARVDRAE AINELGLEMD CKSFQEVIKV KASSDLSLLR DADLVLLSVK SPDTEKTIQD IASVLPSHAV ILSLQNGVAN TQIASGLISN PIYPAVVYVA AGMNGHRTMK HHGRGELLVG SLQEITPPDQ EKLAGICALF ESSGIPCAIT AQIKRDMWLK FLVNCSYNGI SGIGQITYGE MVRVPEIIQQ IDGITHEFIK IAALEGVLIS EAEGREANEL IASTMVTQRS STAQDLARGK KTEIDFLNGY IVQLAKKYGV EVPYNQSVYA LIKMLERAQH N
|
| |