Gene Pnuc_1527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1527 
Symbol 
ID5052783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp1598029 
End bp1598466 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content45% 
IMG OID640471700 
Producthypothetical protein 
Protein accessionYP_001156305 
Protein GI145589708 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAATCG AAGATACCGA CCCAGCAAGA CACGCGGGAA TTGAATACCC AATGGAGGTT 
GGCGCCCCTG TATTTGCTCC AATCAAAGTA GTCGAAGAAA AAGATAAGGC TGTTAATGTT 
GCGCGCCAAA ATGCGAAGCA AGAATACGAG CGCATTATGG AGCAGGCTGA AGTATTGATG 
AAACAGGCAA GAGCATTACA AGCAAGGTTA GATGCGACGG AAATGGTGCA TGGCGCTAAA 
TTTGGCTTTA ATCCTATTCA TGGAAAAATT TACCACTTGT ATTACGACAG CAGAAACGCT 
ACGAATGTCC TGATTCAAAA TGGGCCTAAG GAGTGGAGTT GCGGTATTCC TGATGGCTGG 
ACTTATTCCA TGGCAGTAAA GAAGTTAGGT GACAGTACTT GGGCGGTGAT AGAGGAAGAA 
AACGCCCTTG TTGTATGA
 
Protein sequence
MRIEDTDPAR HAGIEYPMEV GAPVFAPIKV VEEKDKAVNV ARQNAKQEYE RIMEQAEVLM 
KQARALQARL DATEMVHGAK FGFNPIHGKI YHLYYDSRNA TNVLIQNGPK EWSCGIPDGW 
TYSMAVKKLG DSTWAVIEEE NALVV