Gene Pnuc_1523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1523 
Symbol 
ID5052439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp1594972 
End bp1595385 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content42% 
IMG OID640471696 
ProductMarR family transcriptional regulator 
Protein accessionYP_001156301 
Protein GI145589704 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTTTT TACCAACCCT GCGCAGCCTG GTGTCGACCT ATCAAGCGTT TGAGCATTAC 
TCTGCGCCCA ATGTAAAGGC ATTGGGGCTG ACGATGACCC AATTTGATGT GATAGCCACC
TTGGGTAATC AGCCACCTAT GACTTGCAAA GAGTTGGGCG AGAAAACCCT AGTTACTAAG
GGAACTTTGA CCGGTGTGTT GGAGCGCCTA CAGACAAAAG GCATTTTGGA GAGGAAGATT
AATCCAGAAG ATGGTCGTAG TCAGATGATC GGATTGACAG AAAAAGGGCA GAAGTTGTTT
GAAAAAGTAT TTCCAGAACA CCTAAGGCAT CTTGATAGAG CATTTAAAAA TTTATCAGCA
GAGCAACTAA AGCAAGTTGA AGATTCATTA AGTCTATTGA AAAACATTTT TTAA
 
Protein sequence
MNFLPTLRSL VSTYQAFEHY SAPNVKALGL TMTQFDVIAT LGNQPPMTCK ELGEKTLVTK 
GTLTGVLERL QTKGILERKI NPEDGRSQMI GLTEKGQKLF EKVFPEHLRH LDRAFKNLSA
EQLKQVEDSL SLLKNIF