| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1518 |
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| Symbol | |
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| ID | 5052650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1591788 |
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| End bp | 1592435 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640471691 |
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| Product | heme exporter protein CcmA |
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| Protein accession | YP_001156296 |
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| Protein GI | 145589699 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4133] ABC-type transport system involved in cytochrome c biogenesis, ATPase component |
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| TIGRFAM ID | [TIGR01189] heme ABC exporter, ATP-binding protein CcmA |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGCCA ATATTTCTCC AACTATCAGC AAAACCAGTG CAGCGCTAGA GGCGCTTGCT
TTGACCTGTG TCCGTGGCGA AAAACAGCTA TTTGCTGACT TAAGTTTTCA GGTTAGCTCT
GGAGAATGCC TGCATGTCCG CGGGGAGAAT GGTGTAGGTA AGACGAGTTT ATTGCGTTTG
CTGACAGGTT TATCCAAACC GGAGTCTGGA GATGTGCTCT GGAATCAGCA ATCGATTTCC
TCAGAGTCTC AGACTTATCA TCGCGACTTA CTATTTTTGG GACATCGAGA TGCACTCAAG
GAAGACCTCA CCGCTTTAGA GAATTTAAAA ATGTGTGCCG CTATCGATGA CGTAGTGCTT
TCGGATGAAA ATGCCATGGC AGCTTTACGC CGTTTTGGCT TACGCGGTCG CGAGCATTTA
CCTGTTCATT GTTTATCAGC GGGTCAAAAG CGTAGGGTGC TGATGGCTCG CTTGGTAACA
CGTCAAGCGC GCTTATGGAT TTTAGATGAG CCATTTAATG CGCTCGACAT CCATGCAGTA
GCAGAGCTAG AGACTCTCAT TACAGCTCAT TTGATGCTGG ACGGAATAGT GATCTTGACT
AGCCATCAGC CTATAAATCT ATTGAACTTA AAGGTGCTCG ATTTATGA
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| Protein sequence | MTANISPTIS KTSAALEALA LTCVRGEKQL FADLSFQVSS GECLHVRGEN GVGKTSLLRL
LTGLSKPESG DVLWNQQSIS SESQTYHRDL LFLGHRDALK EDLTALENLK MCAAIDDVVL
SDENAMAALR RFGLRGREHL PVHCLSAGQK RRVLMARLVT RQARLWILDE PFNALDIHAV
AELETLITAH LMLDGIVILT SHQPINLLNL KVLDL
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