Gene Pnuc_1516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1516 
Symbol 
ID5052728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp1590359 
End bp1591129 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content44% 
IMG OID640471689 
Productheme exporter protein CcmC 
Protein accessionYP_001156294 
Protein GI145589697 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component 
TIGRFAM ID[TIGR01191] heme exporter protein CcmC 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAATG TGAATAATTT TTCGAATAGC CGTTTGATTA ACTGGTTTAA GTTATCCAGT 
CCTAGCACCT TTTATCCAGT TGCTGGAAAG CTGATCCCCA TTTTTTGGAT CTTAACTGCG
CTCTTCGGTA TTGCTGGTCT TTGGGTCAGT TTTTTTGTTG CACCAGTAGA TGCGGTGCAA
GGACAGGGTT ACCGCATTAT CTTTATTCAT GTCCCCGCAT CTTGGATGTC CATGTTTATT
TATTTGGTGA TGGCAATGTG GGCTGGACTA GGCCTTGTAT TTAATACGCG TCTATCAGCG
ATGATGGCGC AAGCATTAGC ACCGATTGGT GCTTGGATGA CATTCATATC CTTATGGACC
GGGGCCTTTT GGGGTAAACC AATGTGGGGT GCTTGGTGGG TGTGGGACGC GCGCCTCACA
TCTGAATTAA TTTTGCTGTT TCTATATTTG GGCTTTATTG CCCTGCAAGC TTCTATTGAT
AACCCAAGAA GAGCTGATAA GGCGGGTGCT ATTCTTGCTT TAGTTGGCGT GGTCAATATC
CCCGTTATTT ATTTTTCAGT GAAGTGGTGG AATACCTTGC ACCAAGGCGC CTCTGTTTCT
TTGACAAAAT CCCCTGCGAT GGCTCAAACC ATGCTCTTAG GAATGTTATT GATGGCGCTG
TGTTTCTGGA TGTATTCGAT TGCAGTTGGA TTAATGCGAG TACGTACCAT TATTTTGGAG
CGTGAATCCC ATACCGATTG GGTGAGACAA TTGGATGAGG TAAAAAATTA A
 
Protein sequence
MSNVNNFSNS RLINWFKLSS PSTFYPVAGK LIPIFWILTA LFGIAGLWVS FFVAPVDAVQ 
GQGYRIIFIH VPASWMSMFI YLVMAMWAGL GLVFNTRLSA MMAQALAPIG AWMTFISLWT
GAFWGKPMWG AWWVWDARLT SELILLFLYL GFIALQASID NPRRADKAGA ILALVGVVNI
PVIYFSVKWW NTLHQGASVS LTKSPAMAQT MLLGMLLMAL CFWMYSIAVG LMRVRTIILE
RESHTDWVRQ LDEVKN