Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_1516 |
Symbol | |
ID | 5052728 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | - |
Start bp | 1590359 |
End bp | 1591129 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640471689 |
Product | heme exporter protein CcmC |
Protein accession | YP_001156294 |
Protein GI | 145589697 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
TIGRFAM ID | [TIGR01191] heme exporter protein CcmC |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAATG TGAATAATTT TTCGAATAGC CGTTTGATTA ACTGGTTTAA GTTATCCAGT CCTAGCACCT TTTATCCAGT TGCTGGAAAG CTGATCCCCA TTTTTTGGAT CTTAACTGCG CTCTTCGGTA TTGCTGGTCT TTGGGTCAGT TTTTTTGTTG CACCAGTAGA TGCGGTGCAA GGACAGGGTT ACCGCATTAT CTTTATTCAT GTCCCCGCAT CTTGGATGTC CATGTTTATT TATTTGGTGA TGGCAATGTG GGCTGGACTA GGCCTTGTAT TTAATACGCG TCTATCAGCG ATGATGGCGC AAGCATTAGC ACCGATTGGT GCTTGGATGA CATTCATATC CTTATGGACC GGGGCCTTTT GGGGTAAACC AATGTGGGGT GCTTGGTGGG TGTGGGACGC GCGCCTCACA TCTGAATTAA TTTTGCTGTT TCTATATTTG GGCTTTATTG CCCTGCAAGC TTCTATTGAT AACCCAAGAA GAGCTGATAA GGCGGGTGCT ATTCTTGCTT TAGTTGGCGT GGTCAATATC CCCGTTATTT ATTTTTCAGT GAAGTGGTGG AATACCTTGC ACCAAGGCGC CTCTGTTTCT TTGACAAAAT CCCCTGCGAT GGCTCAAACC ATGCTCTTAG GAATGTTATT GATGGCGCTG TGTTTCTGGA TGTATTCGAT TGCAGTTGGA TTAATGCGAG TACGTACCAT TATTTTGGAG CGTGAATCCC ATACCGATTG GGTGAGACAA TTGGATGAGG TAAAAAATTA A
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Protein sequence | MSNVNNFSNS RLINWFKLSS PSTFYPVAGK LIPIFWILTA LFGIAGLWVS FFVAPVDAVQ GQGYRIIFIH VPASWMSMFI YLVMAMWAGL GLVFNTRLSA MMAQALAPIG AWMTFISLWT GAFWGKPMWG AWWVWDARLT SELILLFLYL GFIALQASID NPRRADKAGA ILALVGVVNI PVIYFSVKWW NTLHQGASVS LTKSPAMAQT MLLGMLLMAL CFWMYSIAVG LMRVRTIILE RESHTDWVRQ LDEVKN
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