Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_1511 |
Symbol | |
ID | 5053841 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | - |
Start bp | 1586818 |
End bp | 1587300 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640471684 |
Product | cytochrome C biogenesis protein |
Protein accession | YP_001156289 |
Protein GI | 145589692 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3088] Uncharacterized protein involved in biosynthesis of c-type cytochromes |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGCAAT TTTTTTTCAT GCTCATTCTT GCGGTTGGTA TGCAGTTCGC TAGCGCTAAA GATGCTGTTC CATTGGCAGA AGATCCGGTA ACGGAGCAAC GGTTGATCAG CATTTCCGAG GAAATGCGCT GCTTAGTTTG TCAGAACGAA TCCTTGGCTG GATCTCGTTC AGATCTGGCA AATGATCTTC GTGCCGAGAT TCGCACCCTG ATTCGTGAGG GTAAGACAGA TGATCAAATT AGGTCATTTA TGGTTGAGCG TTATGGTGAT TTTGTTTTGT ATCGTCCTCC TGTAAAGCCT ATAACTTGGC TGCTCTGGAT AGGACCATTT GTCATTTTGG CATTTGGGAT CGCCGGTTTA CTGATTTACT TGCGCCGTCG CAATGCTCTG GTAGCACCCA AAACACTGAC TACTGATGAC AATAAAAAAA TTGATGACTT ACTCAATGCT ATTGCACCAG ATGATGGGGA TAAAAAAGCA TGA
|
Protein sequence | MKQFFFMLIL AVGMQFASAK DAVPLAEDPV TEQRLISISE EMRCLVCQNE SLAGSRSDLA NDLRAEIRTL IREGKTDDQI RSFMVERYGD FVLYRPPVKP ITWLLWIGPF VILAFGIAGL LIYLRRRNAL VAPKTLTTDD NKKIDDLLNA IAPDDGDKKA
|
| |