| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1507 |
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| Symbol | |
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| ID | 5052257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1582036 |
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| End bp | 1583271 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640471680 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001156285 |
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| Protein GI | 145589688 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGTTG CGCAAATCAG GCGTGCCAGT GATGTCCGGG TTATTGGTCT CATTAGCCTG
GCGCACGGTA GCTCACATTT CTTTCATTTA GTTCTTCCAC CCATGTTTCC ATGGTTGAAG
AATGAGTTTG CTCTTAGCTA TGCAGAGCTC GGTTTACTCA TGTCGATTTT CTTTGTGGTG
TCTTGCATAG TGCAAGCCGC ATCTGGATTT TTAGTCGATC GGATTGGGGC AAGACCAGTC
TTATTTGCCG GTGTGGCTCT CTTATCGCTT GCTGGCCTCA CGTATTCTCA AAGCACTGGC
TATTCGATGC TTATCTTGGG TGCTGTGATT GCGGGTTTAG GTAATGGTGT TTTTCACCCA
GTGGATTACA CTTTAATTAA CCATAAAATT TCACCTCCCA ATTTACCTTA TGCCTATTCC
ATGCATGGAG TAACGGGGTA TTTGGGGTGG GCTGCTGCTC CAGCCTTTAT GGTCGGGATC
GCACAGTTGT CTGATTGGCG GATGGCCTTT CTCTCAGCAG CTGCTCTAGA AGCCCTGATA
CTTTTGATTC TTTGGTTAAA TAAGTCTCAA CTCATTGATG ATGTAAAAGA GCGGCATGCA
CAGTCTCATG CTGATGAACA AGCTATTAAC CCTGGTGGTG CCCCAGCTAG TGCTTTTGCA
TTTCTAAAGC TGCCAGCAGT GTGGTTATGT TGGATATTCT TTTTCTTTAG CATGGCTTCT
ACTTCTAGTC TGCAATCATT TGCACCTAGC GGACTCTTTA AAGTCTATCA AATTCCAATC
GACGTAGGAA GTTATTTCAT TACGTTGTTG GCGCTAGGAA GTGCTGGTGG CGTCTTATTC
GGTGGATATT TAGCAGCTAA GTTAAAGGCG CCTGAACGTA TCGTGAGTTC TTGTTTGTCG
GTGACAGTGG TGATGTGTTT GCTGCTTGCA ACAGGAATGG TTTCTGCGGA AATAATTCCA
TTCATCTTTT TCGCGCTTGG CTTTGGTTAC GGTGTCGTTG CACCTTCGCG TGATCTATTG
GTAAAACTAG CTACCCCTAA GGGGGTATCG GGTCGTGTTT ATGGAATTGT TTATTCCGGT
ATTGATTTGG GCGCAGCGGT CGGCCCATTT ATCTTTGGTT TCTTTATGGA CGCCGGACTT
CCAAAGGCCT TATTTATTGG TATTGCCATC TTCCAGATAA TGATTATTCC GACGGTCTTT
AAGGTGTCCT CAAACACTGT ATCCAAAGCG GTCTAA
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| Protein sequence | MTVAQIRRAS DVRVIGLISL AHGSSHFFHL VLPPMFPWLK NEFALSYAEL GLLMSIFFVV
SCIVQAASGF LVDRIGARPV LFAGVALLSL AGLTYSQSTG YSMLILGAVI AGLGNGVFHP
VDYTLINHKI SPPNLPYAYS MHGVTGYLGW AAAPAFMVGI AQLSDWRMAF LSAAALEALI
LLILWLNKSQ LIDDVKERHA QSHADEQAIN PGGAPASAFA FLKLPAVWLC WIFFFFSMAS
TSSLQSFAPS GLFKVYQIPI DVGSYFITLL ALGSAGGVLF GGYLAAKLKA PERIVSSCLS
VTVVMCLLLA TGMVSAEIIP FIFFALGFGY GVVAPSRDLL VKLATPKGVS GRVYGIVYSG
IDLGAAVGPF IFGFFMDAGL PKALFIGIAI FQIMIIPTVF KVSSNTVSKA V
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