Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_1506 |
Symbol | |
ID | 5052848 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | - |
Start bp | 1580465 |
End bp | 1581763 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640471679 |
Product | isocitrate lyase |
Protein accession | YP_001156284 |
Protein GI | 145589687 |
COG category | [C] Energy production and conversion |
COG ID | [COG2224] Isocitrate lyase |
TIGRFAM ID | [TIGR01346] isocitrate lyase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCAGATC GCAAAGCAGA AATCGCAGCG TTACAAAAAG ATTGGGACAC CAATCCACGC TGGAAAGGTA TTACTCGTGG TTATACGGCT GAGGACGTTG TACGTCTTCG CGGCTCATTG AAGATTGAGC ACACTTTAGC CAAGCATGGC GCAGAGCGTC TATGGGAATT GGTTAATAAC GAAGCTTACG TTAACTGTTT AGGTGCTTTG ACTGGTGGTC AAGCAATGCA ACAAGTTAAA GCTGGCGTAC AAGCAATTTA TTTATCTGGT TGGCAAGTGG CTGCTGACGG TAACTCATAC GCAGCGATGT ATCCAGACCA ATCTTTATAT CCAGTAGATT CAGTTCCTAA AATGGTTGAG CGTATTAATA ACTCATTCCA ACGTGCTGAC GAAATTCAAA CTGCAAAAGG TATTCAGCGT GGCGATGCTG GCTTTATCGA ATATTTCGCG CCAATCGTTG CTGATGCTGA AGCAGGTTTC GGTGGCGTAT TGAATGCATT TGAGTTAAGC AAGGCATTGA TCAAGCAAGG TGCTGCTGGC GTTCACTTTG AAGACCAATT GTCTTCAGTG AAGAAGTGCG GTCACTTGGG TGGTAAGGTC TTGTTGCCTA CATCTGAATC AGTTCAAAAA TTGATCTCTG CACGTTTGGC TGCAGACGTA ATGGGTACTC CGACGATCAT CTTGGCCCGT ACCGATGCTG AAGCTGCCGA CTTGTTGACC TCAGACTACG ATGAGAATGA CAAGCCATTC TTGACAGGCG AGCGTACTCC AGAAGGCTTC TACAAAACAC GTAAGGGCTT AGATCAGGCG ATCTCCCGTG GTCTCGCATA CGCTGCTTAC GCAGATATGG TTTGGTGTGA AACAGGTACT CCTGATCTGG ATTTTGCTCG TCAGTTTGCT GAAGCAATTC GTGCGAAGTT CCCAGGAAAG ATGTTGGCAT ACAACTGCTC ACCTTCTTTC AACTGGAAGA AAAACCTGGA TGACGCAACA ATTGCTAAAT TCCAACGTGA GTTGGGCGCG ATGGGTTACA AGTATCAATT TATTACTCTC GCTGGTATCC ACTCTATGTG GTACAACATG TTCGACTTGG CGCAAGACTA CATGCAACGC GGTATGACTG CCTACATCGA GAAAGTACAA GAGCCAGAAT TTGCAGCACG TGATCGTGGA TACACCTTCG TTTCACATCA GCAAGAAGTT GGTACTGGTT ATTTCGATGA TGTAACAACA GTTATTCAAG GTGGTAAGTC TTCCGTAACG GCCTTAACTG GTTCTACTGA AGAAGAGCAG TTCCACTAA
|
Protein sequence | MADRKAEIAA LQKDWDTNPR WKGITRGYTA EDVVRLRGSL KIEHTLAKHG AERLWELVNN EAYVNCLGAL TGGQAMQQVK AGVQAIYLSG WQVAADGNSY AAMYPDQSLY PVDSVPKMVE RINNSFQRAD EIQTAKGIQR GDAGFIEYFA PIVADAEAGF GGVLNAFELS KALIKQGAAG VHFEDQLSSV KKCGHLGGKV LLPTSESVQK LISARLAADV MGTPTIILAR TDAEAADLLT SDYDENDKPF LTGERTPEGF YKTRKGLDQA ISRGLAYAAY ADMVWCETGT PDLDFARQFA EAIRAKFPGK MLAYNCSPSF NWKKNLDDAT IAKFQRELGA MGYKYQFITL AGIHSMWYNM FDLAQDYMQR GMTAYIEKVQ EPEFAARDRG YTFVSHQQEV GTGYFDDVTT VIQGGKSSVT ALTGSTEEEQ FH
|
| |