| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1504 |
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| Symbol | |
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| ID | 5052729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1579179 |
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| End bp | 1579850 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640471677 |
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| Product | 3-oxoacid CoA-transferase, A subunit |
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| Protein accession | YP_001156282 |
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| Protein GI | 145589685 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
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| TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATACAAA AAATTATTCC CGGCGTGGCT GATGCTGTGC GGGATATTGC CAGTGGTTCA
ACCATTTTGG TTTCAGGTTT TGGGGGTGCT GGCTCACCGA TGTTCTTATT GGACGCTCTT
GCGGAGCAGG GTGCTAAAGA TCTCACCATC ATCAGCAATA ATGCGGGCAA CTCCGGCATT
GGCATCTCTA AATTAATTGC TAGAGGTCAG GTTAAAAAGA TGGTTTGCTC CTTTCCGCGT
CAGCCAGAAT CAGGCGCCTT TGATGACTTG TATCGCGCAG GAAAAATTGA GTTGGAGCTA
GTGCCACAAG GAACGCTTGC TGAGCGTATT CGGGCGGGTG GTGCCGGTAT CGGTGGTTTT
TATACTCCTA CCGGATTTGG TACGGAGCTT GCCATAGGAA AAGACACTCG AGTGATTGAT
GGCGTGAATC ATATTTTTGA ATTTGCCATT AAAGCCGACT ACGCCCTTAT TAAGGCGGAT
AAAGGTGATC GTTGGGGCAA TCTCACTTAT CACCGTACAG GTCGTAACTT TGGTCCTATT
ATGGCCACCG CTGCGAGTTG CACTATTGCA CAAGTTAATC AAGTGGTTGA GTTGGGAGAA
TTGGATCCCG AGGTCATTGT GACTCCAGGC ATTTTTGTTA AACGTATTGT GCTTGCTGGA
GCAAAGTCAT GA
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| Protein sequence | MIQKIIPGVA DAVRDIASGS TILVSGFGGA GSPMFLLDAL AEQGAKDLTI ISNNAGNSGI
GISKLIARGQ VKKMVCSFPR QPESGAFDDL YRAGKIELEL VPQGTLAERI RAGGAGIGGF
YTPTGFGTEL AIGKDTRVID GVNHIFEFAI KADYALIKAD KGDRWGNLTY HRTGRNFGPI
MATAASCTIA QVNQVVELGE LDPEVIVTPG IFVKRIVLAG AKS
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