| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_1503 |
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| Symbol | |
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| ID | 5052725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 1578520 |
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| End bp | 1579182 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640471676 |
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| Product | 3-oxoacid CoA-transferase, B subunit |
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| Protein accession | YP_001156281 |
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| Protein GI | 145589684 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
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| TIGRFAM ID | [TIGR02428] 3-oxoacid CoA-transferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGATC TTTCTAAGGT GCAAAAGCGA ACAACAGCAG ATATTGCCAA GCGCATTGTT
CAAGATATTC CAGATGGTGC TCATGTCAAT TTGGGGATTG GTCAGCCTAT GACGATCTCT
AACTACCTAC CATCCGATAA AGAAATTTTG CTGCATTCGG AAAATGGCCT CCTTGGTATG
GGCCCTTTGG CTCAGGGTGA TGAGATTGAT GAAGAACTGG TCAATGCGGG CAAGCAACCT
GTCACCATGC TTCCAGGCGC ATCACTATGC CATCACGCGG ATTCTTTTGT GATGATTCGA
GGCGGGCATA TTGATATCTG TGTCTTAGGT GCTTTTCAGG TCTCTGTAAA AGGGGATATC
GCCAATTGGC GCACTGGCGA CCCTAAGGCG ATTCCAGCAG TTGGTGGTGC AATGGATCTA
GCCCTTGGCG CTAAAAAATT ATTCGTGATG ATGGAGCATT TAACAAAGTC AGGCGAATCT
AAGTTGGTAT CTGAGTGCAC TTATCCATTA ACAGCCTTAG CTGCGGTCGA TTGCATCTAT
ACAGATCTCG CAACCATTGA AGTCACCCCA AAAGGTTTGC TCGCTGTTGA CTGGATAGAT
GGTTTAAGTT TTGAGGAATT ACAAGAGTTA AGCGGTGTGC CGATGCTTCA AAAGTCTGCA
TAA
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| Protein sequence | MIDLSKVQKR TTADIAKRIV QDIPDGAHVN LGIGQPMTIS NYLPSDKEIL LHSENGLLGM
GPLAQGDEID EELVNAGKQP VTMLPGASLC HHADSFVMIR GGHIDICVLG AFQVSVKGDI
ANWRTGDPKA IPAVGGAMDL ALGAKKLFVM MEHLTKSGES KLVSECTYPL TALAAVDCIY
TDLATIEVTP KGLLAVDWID GLSFEELQEL SGVPMLQKSA
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