Gene Pnuc_1501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1501 
Symbol 
ID5052997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp1576926 
End bp1577327 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content43% 
IMG OID640471674 
Producthypothetical protein 
Protein accessionYP_001156279 
Protein GI145589682 
COG category[R] General function prediction only 
COG ID[COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCAAG AAAAACAGGA ACATCGTTTA CCAAGCCCCA TTAGCAACCC TGAAAATACA 
GTATTTTTAG AGGCCGCTCA AAATAATCAG TTAGTGCTGA AGCATTGCAA CGCTTGCAAA
GAGGTGCATT ACTATCCTCG CACTATTTGC CCCCATTGCG GAAGCGATGA CACAACTTGG
GTTAATTCTG ATGGAGTGGG TGAGATCTAT TCTTATACGG TGATGCGACG CGGAGTGGAA
GTTCCATTTG CAATGGCCTA TGTACGTCTT ACAGAGGGAA TCTCTTTGCT AACGCATTTG
ACCAACTGCG ATTTTGATTC GATTCGAGTA GGGCAAAAAG TAAAAGTCAT TTTTCAAGAA
ACTCAAGATG GGCAAAAGAC CCATCTCTTT GAACCTCTTT GA
 
Protein sequence
MSQEKQEHRL PSPISNPENT VFLEAAQNNQ LVLKHCNACK EVHYYPRTIC PHCGSDDTTW 
VNSDGVGEIY SYTVMRRGVE VPFAMAYVRL TEGISLLTHL TNCDFDSIRV GQKVKVIFQE
TQDGQKTHLF EPL