Gene Pnuc_1499 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1499 
Symbol 
ID5052254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp1575845 
End bp1576504 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content44% 
IMG OID640471672 
Productendonuclease III 
Protein accessionYP_001156277 
Protein GI145589680 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAACT TAGAAAAGCG CCGCGCATTT TTTGAGCAGT TAAAGGCGAA TAACCCAAAT 
CCAGAAACAG AATTGGAATA CAGTTCACCT TTTGAATTGC TAATTGCCGT ACTACTATCT 
GCCCAAGCAA CGGATGTCTC GGTAAACAAA GGTACCCGCA AACTATTTAA GATTGCCAAC 
ACCCCGCAAG CCCTTTTAGA TCTTGGCGAA GAAGGTGTCC GTCCTTATAT TCAGCACATT 
GGCCTATTTA ATTCCAAGGG TAAGCATATT CAAGAAACTT GCCGTCTTCT GCTAGAAAAA 
CATGCTGGCC AAGTACCCGA AACACGGGAA GAACTAGAGG CACTACCAGG CGTAGGCCGT 
AAAACAGCCA ACGTCATTTT GAATACGGCG TTTGGTCAAC CCACAATGGC TGTTGATACC 
CATATCTTTC GCGTTTCTAA TCGAACTGGG CTAGCCCCTG GCAAAGATGT TTTAAAAGTA 
GAAGAGCAAT TGCTCAAGCG GGTACCAAAA GAGTATCTAC AAGATGCACA TCATTGGCTT 
ATTCTGCATG GAAGATATAC CTGCAAGGCT CGCAGCCCTG AGTGTGCACA ATGCATTGTT 
GAACCACTCT GTGGATTTAA ACAAAAAACT GGTAAAGGAA AAGTTCGTGG CGATATTTAA
 
Protein sequence
MMNLEKRRAF FEQLKANNPN PETELEYSSP FELLIAVLLS AQATDVSVNK GTRKLFKIAN 
TPQALLDLGE EGVRPYIQHI GLFNSKGKHI QETCRLLLEK HAGQVPETRE ELEALPGVGR 
KTANVILNTA FGQPTMAVDT HIFRVSNRTG LAPGKDVLKV EEQLLKRVPK EYLQDAHHWL 
ILHGRYTCKA RSPECAQCIV EPLCGFKQKT GKGKVRGDI